RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ATP6V1HQ9UI12 483 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 BTNL2Q9UIR0 455 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 GPSM3Q9Y4H4 160 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 ARHGAP10A1A4S6 786 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 SAC3D1A6NKF1 404 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 GSTA4O15217 222 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 PTX3P26022 381 aaPredicted RBP15.96■□□□□ 0.15
CCDC40-201ENST00000269318 ACSL1P33121 698 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 REEP5Q00765 189 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 CCINQ13939 588 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 TRIM69Q86WT6 500 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 FAM86B1Q8N7N1 296 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 DENND6BQ8NEG7 585 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 RNF145Q96MT1 663 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 PHF12Q96QT6 1004 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 IMP3Q9NV31 184 aaKnown RBP15.96■□□□□ 0.15
CCDC40-201ENST00000269318 ADGRE2Q9UHX3 823 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 MOSPD1Q9UJG1 213 aa15.96■□□□□ 0.15
CCDC40-201ENST00000269318 PRSS38A1L453 326 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 ACOX3O15254 700 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 MT-ND1P03886 318 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 GBAP04062 536 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 RETP07949 1114 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 ZCCHC18P0CG32 403 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 ACADMP11310 421 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 RAB28P51157 221 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 CCR8P51685 355 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 CLDN2P57739 230 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PDE7AQ13946 482 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 UAP1L1Q3KQV9 507 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 EOGTQ5NDL2 527 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 KIAA1324Q6UXG2 1013 aaKnown RBP15.95■□□□□ 0.14
CCDC40-201ENST00000269318 LPCAT2Q7L5N7 544 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 SPRED1Q7Z699 444 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 SERPINA11Q86U17 422 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 CBR4Q8N4T8 237 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 ANKRD53Q8N9V6 530 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PRPF18Q99633 342 aaKnown RBP15.95■□□□□ 0.14
CCDC40-201ENST00000269318 AIF1LQ9BQI0 150 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PRO3102Q9H379 93 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 REEP4Q9H6H4 257 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 MYNNQ9NPC7 610 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 GMEB1Q9Y692 573 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 DPPA5A6NC42 116 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 OR52A4PA6NMU1 304 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 CLIC1O00299 241 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 CREG1O75629 220 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 RAP2AP10114 183 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 ENGP17813 658 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 GPX2P18283 190 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 CXCR2P25025 360 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PKLRP30613 574 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 TPMTP51580 245 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 MAP7Q14244 749 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 RBBP5Q15291 538 aaKnown RBP15.95■□□□□ 0.14
CCDC40-201ENST00000269318 FBXO43Q4G163 708 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 ZNF385BQ569K4 471 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 OR52E8Q6IFG1 317 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 ZNF621Q6ZSS3 439 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 SLC9B2Q86UD5 537 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 RAB42Q8N4Z0 105 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 C16orf78Q8WTQ4 265 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 OSBPL11Q9BXB4 747 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PITHD1Q9GZP4 211 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-201ENST00000269318 NT5DC2Q9H857 520 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PRDM8Q9NQV8 689 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 OAZ3Q9UMX2 235 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PCDHGB4Q9UN71 923 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 PCDHGB5Q9Y5G0 923 aa15.95■□□□□ 0.14
CCDC40-201ENST00000269318 C1orf226A1L170 272 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 EVPLLA8MZ36 301 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 C10orf142B7Z368 130 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 H7BY64 318 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 PDLIM1O00151 329 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 RNASET2O00584 256 aaKnown RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 DLGAP1O14490 977 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 EPN2O95208 641 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 CPSF4O95639 269 aaKnown RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 LDLRP01130 860 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 FURINP09958 794 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 GLULP15104 373 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 IGFBP4P22692 258 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 CHN2P52757 468 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 SFSWAPQ12872 951 aaKnown RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 NFATC4Q14934 902 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 NKG7Q16617 165 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 FAM98BQ52LJ0 330 aaKnown RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 TPRG1LQ5T0D9 272 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 ANXA8L1Q5VT79 327 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 FAM71E1Q6IPT2 247 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 ENPP6Q6UWR7 440 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 CHERPQ8IWX8 916 aaKnown RBP15.94■□□□□ 0.14
CCDC40-201ENST00000269318 MFSD2AQ8NA29 543 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 VPS37AQ8NEZ2 397 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 OR2L8Q8NGY9 312 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 FAM162AQ96A26 154 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 BMFQ96LC9 184 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 PRAP1Q96NZ9 151 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 OR2M4Q96R27 311 aa15.94■□□□□ 0.14
CCDC40-201ENST00000269318 C9orf16Q9BUW7 83 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms