RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ILF3Q12906 894 aaKnown RBP eCLIP14.74□□□□□ -0.05
COPS3-201ENST00000268717 MAPKAPK3Q16644 382 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 DLEU7Q6UYE1 221 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.74□□□□□ -0.05
COPS3-201ENST00000268717 SLC22A18ASQ8N1D0 253 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 EFCAB3Q8N7B9 438 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 GOLM1Q8NBJ4 401 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 GPBAR1Q8TDU6 330 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 PIGKQ92643 395 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 GTF2H4Q92759 462 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 TMEM125Q96AQ2 219 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 CXorf40BQ96DE9 158 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SLC45A3Q96JT2 553 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 RMND5AQ9H871 391 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SCHIP1Q9P0W5 487 aaPredicted RBP14.74□□□□□ -0.05
COPS3-201ENST00000268717 ICKQ9UPZ9 632 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 H0Y3Z8 333 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 PRICKLE3O43900 615 aaPredicted RBP14.74□□□□□ -0.05
COPS3-201ENST00000268717 ERN1O75460 977 aaKnown RBP14.74□□□□□ -0.05
COPS3-201ENST00000268717 RASGRP1O95267 797 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 TACR1P25103 407 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 ACTR1BP42025 376 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 ID4P47928 161 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 ACTR1AP61163 376 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 MS4A2Q01362 244 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SPANXN4Q5MJ08 99 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 IRAK1BP1Q5VVH5 260 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 PEAR1Q5VY43 1037 aaPredicted RBP14.74□□□□□ -0.05
COPS3-201ENST00000268717 TCEAL6Q6IPX3 200 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SLC2A7Q6PXP3 512 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 CAMKMTQ7Z624 323 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SYT12Q8IV01 421 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 METTL4Q8N3J2 472 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 RNF175Q8N4F7 328 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 KRTCAP2Q8N6L1 136 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 TTLQ8NG68 377 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 OR2A1Q8NGT9 310 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SLC26A7Q8TE54 656 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 TCEAL3Q969E4 200 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 ANKRD27Q96NW4 1050 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 CGREF1Q99674 301 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SLC39A3Q9BRY0 314 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SARGQ9BW04 601 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 GSDMCQ9BYG8 508 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 TMEM168Q9H0V1 697 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 SPNS1Q9H2V7 528 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 TMEM74BQ9NUR3 256 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 CMTM6Q9NX76 183 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 PILRBQ9UKJ0 227 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 PNMA8BQ9ULN7 279 aaPredicted RBP14.74□□□□□ -0.05
COPS3-201ENST00000268717 L3MBTL1Q9Y468 752 aa14.74□□□□□ -0.05
COPS3-201ENST00000268717 CNOT1A5YKK6 2376 aaKnown RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 ADAMTS9Q9P2N4 1935 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 SCAMP1O15126 338 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 GDF9O60383 454 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 STAMBPO95630 424 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 ANPEPP15144 967 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 S100A3P33764 101 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 HOXD12P35452 270 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 BLKP51451 505 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 DGKQP52824 942 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 RAE1P78406 368 aaKnown RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 FXNQ16595 210 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 RSPO4Q2I0M5 234 aaPredicted RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 AASDHQ4L235 1098 aaPredicted RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 C6orf10Q5SRN2 563 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 LRIF1Q5T3J3 769 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 IQCHQ86VS3 1027 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 PTRH1Q86Y79 214 aaKnown RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 NRROSQ86YC3 692 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 C1orf52Q8N6N3 182 aaKnown RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 OR8J2Q8NGG1 315 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 NETO1Q8TDF5 533 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 ZUFSPQ96AP4 578 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 DUS3LQ96G46 650 aaKnown RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 HSPA12BQ96MM6 686 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 TSSK3Q96PN8 268 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 SH3GL1Q99961 368 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 ACAT2Q9BWD1 397 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 TRIM15Q9C019 465 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 IL1RL2Q9HB29 575 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 DLL3Q9NYJ7 618 aa14.73□□□□□ -0.05
COPS3-201ENST00000268717 WBP11Q9Y2W2 641 aaKnown RBP14.73□□□□□ -0.05
COPS3-201ENST00000268717 CACNA1AO00555 2505 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.72□□□□□ -0.05
COPS3-201ENST00000268717 OR5K4A6NMS3 321 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 PATE3B3GLJ2 98 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 C8BP07358 591 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 THEGLP0DJG4 465 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 CD27P26842 260 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 AK4P27144 223 aaPredicted RBP14.72□□□□□ -0.05
COPS3-201ENST00000268717 RPL3P39023 403 aaKnown RBP14.72□□□□□ -0.05
COPS3-201ENST00000268717 KIR3DL1P43629 444 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 LRRC74AQ0VAA2 488 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 CAPRIN1Q14444 709 aaKnown RBP14.72□□□□□ -0.05
COPS3-201ENST00000268717 ADNP2Q6IQ32 1131 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 NANOGP8Q6NSW7 305 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 RD3Q7Z3Z2 195 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 VN1R5Q7Z5H4 357 aa14.72□□□□□ -0.05
COPS3-201ENST00000268717 PHACTR4Q8IZ21 702 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms