RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FEZF1A0PJY2 475 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 PCDH7O60245 1069 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 LCMT2O60294 686 aaKnown RBP15.68■□□□□ 0.1
TPM1-201ENST00000267996 FKBP6O75344 327 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 CLEC3AO75596 197 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 VIPP01282 170 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 GSTM2P28161 218 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 MSX2P35548 267 aaPredicted RBP15.68■□□□□ 0.1
TPM1-201ENST00000267996 SRSF11Q05519 484 aaKnown RBP15.68■□□□□ 0.1
TPM1-201ENST00000267996 DMWDQ09019 674 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 GPR18Q14330 331 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 KHDRBS2Q5VWX1 349 aaKnown RBP15.68■□□□□ 0.1
TPM1-201ENST00000267996 NANOGP8Q6NSW7 305 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 CAMKMTQ7Z624 323 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 TRIM48Q8IWZ4 208 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 NAGSQ8N159 534 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 TTLQ8NG68 377 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 WDR48Q8TAF3 677 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 SLC37A2Q8TED4 501 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 CREB3L4Q8TEY5 395 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 PATE1Q8WXA2 126 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 SLC22A18Q96BI1 424 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 CGREF1Q99674 301 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 NANOGQ9H9S0 305 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 SERHLQ9NQF3 203 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 BCAP29Q9UHQ4 241 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 MCM8Q9UJA3 840 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 CEP192Q8TEP8 1941 aa15.68■□□□□ 0.1
TPM1-201ENST00000267996 TRBV5-3A0A0A0MS03 114 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 FAM221BA6H8Z2 402 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 OR1F1O43749 312 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 LRATO95237 230 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 KCNH1O95259 989 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 EEFSECP57772 596 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 C1orf61Q13536 156 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 RCN1Q15293 331 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 KIAA1614Q5VZ46 1190 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 FAM20CQ8IXL6 584 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 FAM156AQ8NDB6 213 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 OR8J2Q8NGG1 315 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 DNAJB14Q8TBM8 379 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 DPH7Q9BTV6 452 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 ZNF717Q9BY31 904 aaPredicted RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 AHSPQ9NZD4 102 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 STX18Q9P2W9 335 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 SNX7Q9UNH6 387 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 CACNA1IQ9P0X4 2223 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 ISM1B1AKI9 464 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 H0Y3Z8 333 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 SAP18O00422 153 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 SCAMP2O15127 329 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 AKAP10O43572 662 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 SCN2BO60939 215 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 ERN1O75460 977 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 HOXB9P17482 250 aaPredicted RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 AHRP35869 848 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 KIR3DL1P43629 444 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 WNT3P56703 355 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 NXPH1P58417 271 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 ZNF763Q0D2J5 394 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 FLOT2Q14254 428 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 ZIC1Q15915 447 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 LRIF1Q5T3J3 769 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 GPR180Q86V85 440 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 SFTPA2Q8IWL1 248 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 RBM12BQ8IXT5 1001 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 OR8J3Q8NGG0 315 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 COQ8BQ96D53 544 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 OR2A14Q96R47 310 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 PAIP1Q9H074 479 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 KCNH6Q9H252 994 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 S100A14Q9HCY8 104 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 ATP6V1HQ9UI12 483 aa15.67■□□□□ 0.1
TPM1-201ENST00000267996 EXO1Q9UQ84 846 aaKnown RBP15.67■□□□□ 0.1
TPM1-201ENST00000267996 TDRD6O60522 2096 aaKnown RBP15.66■□□□□ 0.1
TPM1-201ENST00000267996 CROCCQ5TZA2 2017 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 A0A096LPI6 279 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 PLPP1O14494 284 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 HAT1O14929 419 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 VILLO15195 856 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 TNFSF14O43557 240 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 PTPN6P29350 595 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 BSGP35613 385 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 GRK3P35626 688 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 BCL6P41182 706 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 CYP4F2P78329 520 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 ELOCQ15369 112 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 PGS1Q32NB8 556 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 RABL3Q5HYI8 236 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 C6orf10Q5SRN2 563 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 ADCK2Q7Z695 626 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 PAQR7Q86WK9 346 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 PLD3Q8IV08 490 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 MSRB3Q8IXL7 192 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 TMEFF1Q8IYR6 380 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 FAM46DQ8NEK8 389 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 OR7A2PQ8NGA2 310 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 C16orf78Q8WTQ4 265 aa15.66■□□□□ 0.1
TPM1-201ENST00000267996 GFM2Q969S9 779 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms