RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 A0A096LPI6 279 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 ARPC2O15144 300 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 PRICKLE3O43900 615 aaPredicted RBP11.08□□□□□ -0.63
SCAF11-201ENST00000266589 ERN1O75460 977 aaKnown RBP11.08□□□□□ -0.63
SCAF11-201ENST00000266589 TBX6O95947 436 aaPredicted RBP11.08□□□□□ -0.63
SCAF11-201ENST00000266589 SERPINB1P30740 379 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 SOX11P35716 441 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 HPCAL1P37235 193 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 RHDQ02161 417 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 LRIF1Q5T3J3 769 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 ANKRD26P1Q6NSI1 321 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 PLD3Q8IV08 490 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 OR2L3Q8NG85 312 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 OR8J2Q8NGG1 315 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 DNAJB8Q8NHS0 232 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 GPBAR1Q8TDU6 330 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 NELL1Q92832 810 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 KLHDC7BQ96G42 594 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 INPP5KQ9BT40 448 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 MS4A8Q9BY19 250 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 GSDMCQ9BYG8 508 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 TRIM15Q9C019 465 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 MUC13Q9H3R2 512 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 SLC6A20Q9NP91 592 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 SLC6A13Q9NSD5 602 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 OR6C2Q9NZP2 312 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 USP22Q9UPT9 525 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 MAPRE3Q9UPY8 281 aa11.08□□□□□ -0.63
SCAF11-201ENST00000266589 TRBV5-3A0A0A0MS03 114 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 TCRBV3S1A0A5B6 114 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 ISM1B1AKI9 464 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 NVLO15381 856 aaKnown RBP11.08□□□□□ -0.64
SCAF11-201ENST00000266589 GSNP06396 782 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 KLK1P06870 262 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 CHRM5P08912 532 aaPredicted RBP11.08□□□□□ -0.64
SCAF11-201ENST00000266589 GRIA3P42263 894 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 CDKN2CP42773 168 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 WNT3P56703 355 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 ABATP80404 500 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 CYP4F3Q08477 520 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 PLCL1Q15111 1095 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 RUNDC3AQ59EK9 446 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 PRRT3Q5FWE3 981 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 KHDRBS2Q5VWX1 349 aaKnown RBP11.08□□□□□ -0.64
SCAF11-201ENST00000266589 LCN8Q6JVE9 175 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 SLC9B2Q86UD5 537 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 PTRH1Q86Y79 214 aaKnown RBP11.08□□□□□ -0.64
SCAF11-201ENST00000266589 TRIM48Q8IWZ4 208 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 TMEM132CQ8N3T6 1108 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 SPEM1Q8N4L4 309 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 FBXL6Q8N531 539 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 PJA1Q8NG27 643 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 ZUFSPQ96AP4 578 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 THUMPD3Q9BV44 507 aaKnown RBP11.08□□□□□ -0.64
SCAF11-201ENST00000266589 SORBS1Q9BX66 1292 aaKnown RBP11.08□□□□□ -0.64
SCAF11-201ENST00000266589 CHRDQ9H2X0 955 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 SRMSQ9H3Y6 488 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 TAAR2Q9P1P5 351 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 ACTR3BQ9P1U1 418 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 MCM8Q9UJA3 840 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 PCDHB14Q9Y5E9 798 aa11.08□□□□□ -0.64
SCAF11-201ENST00000266589 GABRR3A8MPY1 467 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 METTL12A8MUP2 240 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PLPP1O14494 284 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 RFXANKO14593 260 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 LCMT2O60294 686 aaKnown RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 SEMA3DO95025 777 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CCNDBP1O95273 360 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CELA2BP08218 269 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 LAMP1P11279 417 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PIM1P11309 404 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CTSEP14091 401 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 NCK1P16333 377 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 HTR1EP28566 365 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CMPK1P30085 196 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 GRK3P35626 688 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 OR4D2P58180 307 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 MUM1Q2TAK8 710 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 WLSQ5T9L3 541 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CPTPQ5TA50 214 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 DEPDC1Q5TB30 811 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 IYDQ6PHW0 289 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PARGQ86W56 976 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 SPPL2CQ8IUH8 684 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 GJD3Q8N144 294 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PQLC1Q8N2U9 271 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 FAM174AQ8TBP5 190 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 C16orf78Q8WTQ4 265 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PATE1Q8WXA2 126 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 MIEF2Q96C03 454 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 GBP5Q96PP8 586 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PANX1Q96RD7 426 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 F2RL3Q96RI0 385 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 SH3GL1Q99961 368 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 ECSITQ9BQ95 431 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 DPH7Q9BTV6 452 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 DUSP26Q9BV47 211 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 IKZF5Q9H5V7 419 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 TMEM184CQ9NVA4 438 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms