RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CREG2Q8IUH2 290 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 PALM2Q8IXS6 379 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 SHISA5Q8N114 240 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 PDIK1LQ8N165 341 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 MYO1HQ8N1T3 1032 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 ST6GALNAC3Q8NDV1 305 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 BRIX1Q8TDN6 353 aaKnown RBP9.21□□□□□ -0.94
VPS41-201ENST00000265745 GRHL3Q8TE85 626 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 FAR1Q8WVX9 515 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 HAS2Q92819 552 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 TM4SF19Q96DZ7 209 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 CERS2Q96G23 380 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 CNDP1Q96KN2 507 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 IMMP1LQ96LU5 166 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 PWWP2AQ96N64 755 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 MACROD1Q9BQ69 325 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 GRPEL1Q9HAV7 217 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 RIC8BQ9NVN3 520 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 MKL2Q9ULH7 1088 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 SLC5A6Q9Y289 635 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 VWA7Q9Y334 891 aa9.21□□□□□ -0.94
VPS41-201ENST00000265745 TNRC6AQ8NDV7 1962 aaKnown RBP9.21□□□□□ -0.94
VPS41-201ENST00000265745 FEZF1A0PJY2 475 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 TP73O15350 636 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 JRKO75564 520 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 LDLRP01130 860 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 HIST1H2AGP0C0S8 130 aaPredicted RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 CDH1P12830 882 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 ICAM2P13598 275 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 HIST1H2ADP20671 130 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 CCND1P24385 295 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 BCL6P41182 706 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 ELK3P41970 407 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 PGGT1BP53609 377 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 EEF1A2Q05639 463 aaKnown RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 FRG1Q14331 258 aaKnown RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 MORF4L2Q15014 288 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 PCOLCEQ15113 449 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 HP1BP3Q5SSJ5 553 aaPredicted RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 CAPN13Q6MZZ7 669 aaPredicted RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 ALKBH2Q6NS38 261 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 HIBCHQ6NVY1 386 aaPredicted RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 RPUSD3Q6P087 351 aaKnown RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 TRMT10BQ6PF06 316 aaKnown RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 SYDE1Q6ZW31 735 aaPredicted RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 PRSS41Q7RTY9 318 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 AMER2Q8N7J2 671 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 KCT2Q8NC54 265 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 CAMKVQ8NCB2 501 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 ABHD11Q8NFV4 315 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 OR1N1Q8NGS0 311 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 OR51Q1Q8NH59 317 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 LINGO1Q96FE5 620 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 SNF8Q96H20 258 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 HIST1H2AHQ96KK5 128 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 OR4K3Q96R72 315 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 CITED4Q96RK1 184 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 CYTH2Q99418 400 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 HIST1H2AJQ99878 128 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 WDR83Q9BRX9 315 aaKnown RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 H2AFJQ9BTM1 129 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 FAM129AQ9BZQ8 928 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 VN1R1Q9GZP7 353 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 ZNF700Q9H0M5 742 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 PPANQ9NQ55 473 aaKnown RBP9.2□□□□□ -0.94
VPS41-201ENST00000265745 PLA2G3Q9NZ20 509 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 PTGFRNQ9P2B2 879 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 SLC17A6Q9P2U8 582 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 TEX264Q9Y6I9 313 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 ICE1Q9Y2F5 2266 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 DOPEY1Q5JWR5 2465 aa9.2□□□□□ -0.94
VPS41-201ENST00000265745 SHANK1Q9Y566 2161 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 TRAV17A0A0B4J275 112 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 A1L4Q6 167 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 DYTNA2CJ06 578 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 OR2W5A6NFC9 320 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 USP27XA6NNY8 438 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 SGK494L7N484 410 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 E2F3O00716 465 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 CDK2AP1O14519 115 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 WFS1O76024 890 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 CELA2AP08217 269 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 CYC1P08574 325 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 C8orf89P0DMQ9 161 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 IL1RNP18510 177 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 GRK3P35626 688 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 XCR1P46094 333 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 TNFSF10P50591 281 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 AP1S2P56377 157 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 ARG2P78540 354 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 DR1Q01658 176 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 TSNAXIP1Q2TAA8 658 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 HECTD2Q5U5R9 776 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 STEAP4Q687X5 459 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 DUPD1Q68J44 220 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 LCTLQ6UWM7 567 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 TMEM207Q6UWW9 146 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 ASPGQ86U10 573 aa9.19□□□□□ -0.94
VPS41-201ENST00000265745 SLC26A11Q86WA9 606 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms