RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 GSKIPQ9P0R6 139 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 GABBR2O75899 941 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 BPNT1O95861 308 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 AHSGP02765 367 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 MSS51Q4VC12 460 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 GDF6Q6KF10 455 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 LRRC70Q7Z2Q7 622 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 TMEM80Q96HE8 168 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 WRAP73Q9P2S5 460 aaPredicted RBP17.48■□□□□ 0.39
COL5A3-201ENST00000264828 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
COL5A3-201ENST00000264828 IGKV6D-41A0A0C4DH26 115 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 MANBAO00462 879 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 CREG1O75629 220 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 CSF2P04141 144 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 C8AP07357 584 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 GSTM3P21266 225 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 CD72P21854 359 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ACVRL1P37023 503 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 CDK6Q00534 326 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 MAD2L1BPQ15013 274 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 SLC30A2Q9BRI3 323 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 SMURF1Q9HCE7 757 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 PLGP00747 810 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ACTR1BP42025 376 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ACTR1AP61163 376 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 DENND6BQ8NEG7 585 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 CDKN2AIPNLQ96HQ2 116 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ALPK1Q96QP1 1244 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 HSD3B7Q9H2F3 369 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 SUV39H2Q9H5I1 410 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 RDH8Q9NYR8 311 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 PCDHGB5Q9Y5G0 923 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 A0A1W2PRU2 124 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 TRIM64A6NGJ6 449 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 IRAK2O43187 625 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ITGA5P08648 1049 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 PEPDP12955 493 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 RFTN1Q14699 578 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 NCEH1Q6PIU2 408 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 SLC35B2Q8TB61 432 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 RAB11FIP5Q9BXF6 653 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 WDR26Q9H7D7 661 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ZBTB26Q9HCK0 441 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 PCDHGB1Q9Y5G3 927 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF142P52746 1687 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 LDB2O43679 373 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF16P17020 682 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ATXN7L3Q14CW9 347 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 FBXO43Q4G163 708 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 CCM2Q9BSQ5 444 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ABI3Q9P2A4 366 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 RNF11Q9Y3C5 154 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 NPIPA5E9PKD4 350 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 CSTBP04080 98 aaKnown RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 HCKP08631 526 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 FNTBP49356 437 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 DNAJB7Q7Z6W7 309 aaPredicted RBP17.47■□□□□ 0.39
COL5A3-201ENST00000264828 SLC22A17Q8WUG5 538 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 OR51I1Q9H343 314 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ITM2CQ9NQX7 267 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 DMAC2Q9NW81 257 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 NPIPA1Q9UND3 350 aa17.47■□□□□ 0.39
COL5A3-201ENST00000264828 ILVBLA1L0T0 632 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 SSX6Q7RTT6 188 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 COQ8AQ8NI60 647 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 CD300LFQ8TDQ1 290 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 TIGARQ9NQ88 270 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 ATRNL1Q5VV63 1379 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 CDH11P55287 796 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 HNRNPA0Q13151 305 aaKnown RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 TGFBIQ15582 683 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 PRR23BQ6ZRT6 265 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 TTLQ8NG68 377 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 CASTOR1Q8WTX7 329 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 SLC28A3Q9HAS3 691 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 C14orf105Q9NVL8 296 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 C14orf166Q9Y224 244 aaKnown RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 PRELID1Q9Y255 219 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 KCTD3Q9Y597 815 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 WASH3PC4AMC7 463 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 M0QX08 132 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 C6orf47O95873 294 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 RPL10P27635 214 aaKnown RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 PPIGQ13427 754 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 SH3RF2Q8TEC5 729 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 YTHDF1Q9BYJ9 559 aaKnown RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 BLOC1S5-TXNDC5H3BN57 136 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 CLDN7O95471 211 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 ATP1B2P14415 290 aaPredicted RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 ACADVLP49748 655 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 RNF144AP50876 292 aaPredicted RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 DSG2Q14126 1118 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 MMAAQ8IVH4 418 aaKnown RBP17.46■□□□□ 0.39
COL5A3-201ENST00000264828 ADAM7Q9H2U9 754 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 CCSER2Q9H7U1 834 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 ENAMQ9NRM1 1142 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 HSPB11Q9Y547 144 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 ABCC6O95255 1503 aa17.46■□□□□ 0.39
COL5A3-201ENST00000264828 RAB36O95755 333 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms