RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SLC12A4Q9UP95 1085 aa9.32□□□□□ -0.92
SNRNP40-201ENST00000263694 PCNX2A6NKB5 2137 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 ZNF292O60281 2723 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 A0A0G2JN53 185 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 SLC28A1O00337 649 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 FCHO1O14526 889 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 LSM1O15116 133 aaKnown RBP9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 RGS14O43566 566 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 SEC22BO75396 215 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 B3GALT4O96024 378 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 PNLIPP16233 465 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 CKMT2P17540 419 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 HRH2P25021 359 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 GRK3P35626 688 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 DIO3P55073 304 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 NME5P56597 212 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 GPLD1P80108 840 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 UBAP2LQ14157 1087 aaKnown RBP9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 AP5B1Q2VPB7 878 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 C6orf136Q5SQH8 315 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 CACHD1Q5VU97 1274 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 ASCL5Q7RTU5 278 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 VN1R4Q7Z5H5 301 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 NAXDQ8IW45 347 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 KIRREL3Q8IZU9 778 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 MFSD9Q8NBP5 474 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 OR6C4Q8NGE1 309 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 CEP70Q8NHQ1 597 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 CREB3L4Q8TEY5 395 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 NUDT8Q8WV74 236 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 ZUFSPQ96AP4 578 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 REPS1Q96D71 796 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 ZDHHC12Q96GR4 267 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 MAGEB10Q96LZ2 347 aaPredicted RBP9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 CCDC28BQ9BUN5 200 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 SORBS1Q9BX66 1292 aaKnown RBP9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 MRPL1Q9BYD6 325 aaKnown RBP9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 NMUR2Q9GZQ4 415 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 IRF2BPLQ9H1B7 796 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 RHBGQ9H310 441 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 LRRN3Q9H3W5 708 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 NT5DC2Q9H857 520 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 C1GALT1Q9NS00 363 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 ARMCX1Q9P291 453 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 FTSJ1Q9UET6 329 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 EPHA6Q9UF33 1036 aa9.31□□□□□ -0.92
SNRNP40-201ENST00000263694 SCN2AQ99250 2005 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 TLCD2A6NGC4 264 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 C4orf51C9J302 202 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 H0YGG7 62 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 FOXE1O00358 373 aaPredicted RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 RTCAO00442 366 aaKnown RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 P2RX6O15547 441 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 NDUFS4O43181 175 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 C9P02748 559 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 GBAP04062 536 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 EIF2S1P05198 315 aaKnown RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 PRR35P0CG20 571 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 LBPP18428 481 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 HNRNPH1P31943 449 aaKnown RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 PIK3CBP42338 1070 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 DUSP3P51452 185 aaPredicted RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 ARF3P61204 181 aaPredicted RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 RPS15AP62244 130 aaKnown RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 RPL38P63173 70 aaKnown RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 HYAL2Q12891 473 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 CSTF3Q12996 717 aaKnown RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 KIF26BQ2KJY2 2108 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 ATP6AP1LQ52LC2 224 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 PLXDC1Q8IUK5 500 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 FITM2Q8N6M3 262 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 ANKS4BQ8N8V4 417 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 C19orf47Q8N9M1 422 aaKnown RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 FNDC5Q8NAU1 212 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 RCBTB1Q8NDN9 531 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 WDR48Q8TAF3 677 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 NAT6Q93015 286 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 UBE2E3Q969T4 207 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 RNF31Q96EP0 1072 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 OR2A5Q96R48 311 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 RAB33BQ9H082 229 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 LRTM1Q9HBL6 345 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 RIC8BQ9NVN3 520 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 VPS29Q9UBQ0 182 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 BAIAP2L1Q9UHR4 511 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 ZFP69BQ9UJL9 534 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 POLR3HQ9Y535 204 aaPredicted RBP9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 KLK4Q9Y5K2 254 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 AP1M2Q9Y6Q5 423 aa9.3□□□□□ -0.92
SNRNP40-201ENST00000263694 SERTM1A2A2V5 107 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 C9JVG2 144 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 UBDO15205 165 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 RRP9O43818 475 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 LRP3O75074 770 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 EZRP15311 586 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CLDN6P56747 220 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 VSX2P58304 361 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 RAE1P78406 368 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TBL3Q12788 808 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms