RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 CASC3O15234 703 aaKnown RBP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 TAPBPO15533 448 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 TRIM13O60858 407 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 CLEC3AO75596 197 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 KRT6AP02538 564 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 ALBP02768 609 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 KRT6BP04259 564 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 SERPINA6P08185 405 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 RAB40ALP0C0E4 278 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 IL10P22301 178 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 PTX3P26022 381 aaPredicted RBP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 HMOX2P30519 316 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 CASP2P42575 452 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 KRT6CP48668 564 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 RAP1GDS1P52306 607 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 ZNF844Q08AG5 666 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 COL9A2Q14055 689 aaPredicted RBP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 SLBPQ14493 270 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 HHATQ5VTY9 493 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 TRIM40Q6P9F5 258 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 NKD1Q969G9 470 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 MMABQ96EY8 250 aaPredicted RBP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 CMTM7Q96FZ5 175 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 CNDP1Q96KN2 507 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 CATSPER2Q96P56 530 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 GPR78Q96P69 363 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 OR2A5Q96R48 311 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 TRMOQ9BU70 441 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 SARGQ9BW04 601 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 ZNF358Q9NW07 568 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 CUEDC1Q9NWM3 386 aaPredicted RBP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 MKS1Q9NXB0 559 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 FAM53CQ9NYF3 392 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 FOXJ2Q9P0K8 574 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 FARSAQ9Y285 508 aaKnown RBP11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 PLLPQ9Y342 182 aa11.99□□□□□ -0.49
CLNS1A-201ENST00000263309 ITPR1Q14643 2758 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ARHGEF17Q96PE2 2063 aaPredicted RBP11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ARHGAP10A1A4S6 786 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 FITM1A5D6W6 292 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 KRT87PA6NCN2 255 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 SYNDIG1LA6NDD5 238 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ZNF891A8MT65 544 aaPredicted RBP11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 H0YIG0 161 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 PEX12O00623 359 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 PCDH17O14917 1159 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 SASH3O75995 380 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 FBLP22087 321 aaKnown RBP11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 PIK3CBP42338 1070 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 SCTRP47872 440 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 KCNC1P48547 511 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 CSRP3P50461 194 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 PKNOX1P55347 436 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 DNAJB13P59910 316 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 NFKB2Q00653 900 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 CLCQ05315 142 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 DOC2AQ14183 400 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ZIC1Q15915 447 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 AP5B1Q2VPB7 878 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 TMEM35AQ53FP2 167 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 CATSPEREQ5SY80 951 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 UBAP2Q5T6F2 1119 aaKnown RBP11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ARHGAP40Q5TG30 622 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 LIPMQ5VYY2 423 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 GRHL2Q6ISB3 625 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 C16orf46Q6P387 395 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ZYG11AQ6WRX3 759 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 SLCO4C1Q6ZQN7 724 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 GOLGA7Q7Z5G4 137 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 NUDCD3Q8IVD9 361 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 DSELQ8IZU8 1212 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 CYP4X1Q8N118 509 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 METTL21AQ8WXB1 218 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ESAMQ96AP7 390 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 QRFPRQ96P65 431 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 NRTNQ99748 197 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 PAIP2Q9BPZ3 127 aaKnown RBP11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 NTMT1Q9BV86 223 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 ZNF282Q9UDV7 671 aaPredicted RBP11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 IKZF3Q9UKT9 509 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 MRPS33Q9Y291 106 aaKnown RBP11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 PCDHGA4Q9Y5G9 962 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 SLC22A7Q9Y694 548 aa11.98□□□□□ -0.49
CLNS1A-201ENST00000263309 DMXL2Q8TDJ6 3036 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 TK2O00142 265 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 PLIN3O60664 434 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 CTSVO60911 334 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 GUCY1B2O75343 617 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 SPAG7O75391 227 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 RECKO95980 971 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 JAK1P23458 1154 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 VARSP26640 1264 aaKnown RBP11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 TLX1P31314 330 aaPredicted RBP11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 SERPINB5P36952 375 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 FOLR3P41439 243 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 STAT5AP42229 794 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 AP2B1P63010 937 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 REEP5Q00765 189 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 MEF2AQ02078 507 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms