RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 KLHL35Q6PF15 583 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 FAM129CQ86XR2 697 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 WDR75Q8IWA0 830 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 TUBB1Q9H4B7 451 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 HAT1O14929 419 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 CBFA2T3O75081 653 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 ST6GAL1P15907 406 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 CCR8P51685 355 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 KIF2BQ8N4N8 673 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 ABHD11Q8NFV4 315 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 PTCD3Q96EY7 689 aaKnown RBP26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 NUF2Q9BZD4 464 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 TRPS1Q9UHF7 1281 aa26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 ZNF490Q9ULM2 529 aaPredicted RBP26.37■■□□□ 1.81
SMARCD3-201ENST00000262188 DUX1O43812 170 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 TROVE2P10155 538 aaKnown RBP eCLIP26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 JUPP14923 745 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 CKMT2P17540 419 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 CDH3P22223 829 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 FCRL6Q6DN72 434 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 CLYBLQ8N0X4 340 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 OR6C4Q8NGE1 309 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 NAT6Q93015 286 aa26.36■■□□□ 1.81
SMARCD3-201ENST00000262188 LCMT2O60294 686 aaKnown RBP26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 HNRNPCL1O60812 293 aaKnown RBP26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 SH3BGRLO75368 114 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 FGF4P08620 206 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 HMOX2P30519 316 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 CD97P48960 835 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 DDX39BQ13838 428 aaKnown RBP26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 LIPJQ5W064 366 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 GRHL2Q6ISB3 625 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 TWIST2Q8WVJ9 160 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 WDR60Q8WVS4 1066 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 A0A0J9YY10 115 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 SLC9B1P1A6NJY1 282 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 A8MU76 341 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 ZNF195O14628 629 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 UROSP10746 265 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 PCNAP12004 261 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 PNLIPP16233 465 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 GPLD1P80108 840 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 ABATP80404 500 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 CYP4F3Q08477 520 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 ABRAXAS2Q15018 415 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 SLC5A12Q1EHB4 618 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 FIGLAQ6QHK4 219 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 WDR34Q96EX3 536 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 PELI2Q9HAT8 420 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 USH1CQ9Y6N9 552 aa26.35■■□□□ 1.81
SMARCD3-201ENST00000262188 IGHV5-51A0A0C4DH38 117 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 MATN2O00339 956 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 PIP5K1BO14986 540 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 LINC00032P0C843 101 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 CASP2P42575 452 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 CYP4F2P78329 520 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 BTKQ06187 659 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 PCDH1Q08174 1060 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 TBCCQ15814 346 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 ZNF425Q6IV72 752 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 OR4K1Q8NGD4 311 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 BAHD1Q8TBE0 780 aaPredicted RBP26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 C3orf30Q96M34 536 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 MTERF1Q99551 399 aaKnown RBP26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 LRRN3Q9H3W5 708 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 GIMAP2Q9UG22 337 aa26.34■■□□□ 1.81
SMARCD3-201ENST00000262188 ATP6AP2A0A1C7CYW4 349 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 MANBAO00462 879 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 HCRTR1O43613 425 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 CTSVO60911 334 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 ATP6AP2O75787 350 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 CCNDBP1O95273 360 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 DUSP3P51452 185 aaPredicted RBP26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 E2F2Q14209 437 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 GGTA1PQ4G0N0 100 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 ZNF574Q6ZN55 896 aaPredicted RBP26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 PAQR7Q86WK9 346 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 DDIASQ8IXT1 998 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 ALDH16A1Q8IZ83 802 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 ANKRD53Q8N9V6 530 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 OR7G3Q8NG95 312 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 MACROD1Q9BQ69 325 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 EBF4Q9BQW3 602 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 EPB41L1Q9H4G0 881 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 EHD1Q9H4M9 534 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 PRM3Q9NNZ6 103 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 FAM60AQ9NP50 221 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 NMRK1Q9NWW6 199 aa26.33■■□□□ 1.81
SMARCD3-201ENST00000262188 PDYNP01213 254 aa26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 ENO1P06733 434 aaKnown RBP26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 SEPHS1P49903 392 aa26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 AQP5P55064 265 aa26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 REEP5Q00765 189 aa26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 LIN52Q52LA3 116 aa26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 WDR55Q9H6Y2 383 aaPredicted RBP26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 TMEM184CQ9NVA4 438 aa26.33■■□□□ 1.8
SMARCD3-201ENST00000262188 COL5A1P20908 1838 aaPredicted RBP26.32■■□□□ 1.8
SMARCD3-201ENST00000262188 GOLGA8QA0A0J9YX86 632 aa26.32■■□□□ 1.8
SMARCD3-201ENST00000262188 GOLGA8OA6NCC3 632 aa26.32■■□□□ 1.8
SMARCD3-201ENST00000262188 GOLGA8NF8WBI6 632 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms