RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CWH43Q9H720 699 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SPHK2Q9NRA0 654 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TFR2Q9UP52 801 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 RETP07949 1114 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ALOX12P18054 663 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 IGFBP4P22692 258 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GADD45AP24522 165 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CSTF2P33240 577 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TSFMP43897 325 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 EFR3AQ14156 821 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PYDC2Q56P42 97 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GTF2IRD2BQ6EKJ0 949 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GTF2IRD2Q86UP8 949 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 COL26A1Q96A83 441 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC35A5Q9BS91 424 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TRIM39Q9HCM9 518 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FBXL12Q9NXK8 326 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 AASSQ9UDR5 926 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FTCDNL1E5RQL4 147 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ECI2O75521 394 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ERAL1O75616 437 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GJA1P17302 382 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CXCR1P25024 350 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF41P51814 821 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TMBIM6P55061 237 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 YPEL5P62699 121 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF45Q02386 682 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CNTN4Q8IWV2 1026 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GLYATL1Q969I3 302 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 C5orf34Q96MH7 638 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ARNT2Q9HBZ2 717 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TBCCD1Q9NVR7 557 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TAS2R8Q9NYW2 309 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GGT7Q9UJ14 662 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 WASF2Q9Y6W5 498 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TUBGCP6Q96RT7 1819 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MEGF11A6BM72 1044 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PIP5K1BO14986 540 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HNRNPLP14866 589 aaKnown RBP eCLIP4.18□□□□□ -1.742e-8■■■■■ 55.6
VPS13C-202ENST00000261517 MPSTP25325 297 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 UGT2B10P36537 528 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RFX3P48380 749 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 XKP51811 444 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RHDQ02161 417 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PRAMEF8Q5VWM4 474 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PRAMEF7Q5VXH5 474 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CYP2R1Q6VVX0 501 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZCCHC23Q6ZST2 131 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 DET1Q7L5Y6 550 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ANKFN1Q8N957 763 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF516Q92618 1163 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 NACC2Q96BF6 587 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PGAP2Q9UHJ9 254 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 C17orf113A0A1B0GUU1 675 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 A0A1B0GVC2 190 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 OR51F1A6NGY5 319 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HAS3O00219 553 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CYP17A1P05093 508 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CD72P21854 359 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 DGKEP52429 567 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CASP6P55212 293 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TAS2R39P59534 338 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RTP2Q5QGT7 225 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CYP4X1Q8N118 509 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ARL14EPQ8N8R7 260 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 OR7D4Q8NG98 312 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CHFRQ96EP1 664 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TIMM29Q9BSF4 260 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TRMT13Q9NUP7 481 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 F5P12259 2224 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PTGES3LE9PB15 166 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SNX4O95219 450 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HSD17B1P14061 328 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MATN1P21941 496 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 BMPR1AP36894 532 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 NCBP2P52298 156 aaKnown RBP eCLIP4.18□□□□□ -1.742e-6■□□□□ 9.3
VPS13C-202ENST00000261517 ARHGAP8P85298 464 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ATP6AP1Q15904 470 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZBTB6Q15916 424 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 COLEC12Q5KU26 742 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF852Q6ZMS4 543 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 LYSMD3Q7Z3D4 306 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TIGD4Q8IY51 512 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 FBXL8Q96CD0 374 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PCED1AQ9H1Q7 454 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CAB39LQ9H9S4 337 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GMEB2Q9UKD1 530 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CLIC1O00299 241 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GALTP07902 379 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TFPIP10646 304 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ICAM2P13598 275 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 JUPP14923 745 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GRHL2Q6ISB3 625 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ARHGAP11AQ6P4F7 1023 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 B3GNT9Q6UX72 402 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HTR3DQ70Z44 454 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 BPIFB6Q8NFQ5 453 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MCMBPQ9BTE3 642 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SCAMP3O14828 347 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CASKO14936 926 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms