RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 MFSD1Q9H3U5 465 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 TM9SF3Q9HD45 589 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC1A7O00341 560 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 QSOX1O00391 747 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SDHDO14521 159 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 NRP1O14786 923 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 ATE1O95260 518 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SMPD1P17405 629 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 S100GP29377 79 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 HTR7P34969 479 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GBX2P52951 348 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 MS4A2Q01362 244 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GRB7Q14451 532 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GFOD2Q3B7J2 385 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 TIGD5Q53EQ6 642 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 MTFR2Q6P444 385 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 SDR16C5Q8N3Y7 309 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR10G6Q8NH81 332 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 NTAN1Q96AB6 310 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 MED31Q9Y3C7 131 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 ATRNL1Q5VV63 1379 aa9.47□□□□□ -0.89
CTDSPL2-201ENST00000260327 GIMD1P0DJR0 217 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 GSTM2P28161 218 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 ERP29P30040 261 aaKnown RBP9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 ANKFN1Q8N957 763 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC35G5Q96KT7 338 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 SLC29A1Q99808 456 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 IMP3Q9NV31 184 aaKnown RBP9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 IRAK2O43187 625 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 B4GAT1O43505 415 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 BCAS1O75363 584 aaPredicted RBP9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 CDK14O94921 469 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 BCHEP06276 602 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 GABRR2P28476 465 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 PPP3R1P63098 170 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 NOL9Q5SY16 702 aaKnown RBP9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 OR4F6Q8NGB9 312 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 HAPLN3Q96S86 360 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 TSSK6Q9BXA6 273 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 FAM124BQ9H5Z6 455 aaPredicted RBP9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 MGAT4CQ9UBM8 478 aa9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 RUVBL1Q9Y265 456 aaKnown RBP9.46□□□□□ -0.89
CTDSPL2-201ENST00000260327 CAPN15O75808 1086 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 VNN2O95498 520 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ACVR2AP27037 513 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 VLDLRP98155 873 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ATAT1Q5SQI0 421 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMEM130Q8N3G9 435 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMEM199Q8N511 208 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SNAPC3Q92966 411 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ALPK1Q96QP1 1244 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 AIF1LQ9BQI0 150 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 KIAA1522Q9P206 1035 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SEC14L4Q9UDX3 406 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 A0A0G2JN53 185 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 INPPL1O15357 1258 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 USP2O75604 605 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 TUBG1P23258 451 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 GADD45AP24522 165 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 AGTR2P50052 363 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 EIF5AP63241 154 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 RPP38P78345 283 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 PAFAH1B3Q15102 231 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 C11orf91Q3C1V1 193 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF678Q5SXM1 525 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZSCAN1Q8NBB4 408 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 LILRB4Q8NHJ6 448 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 GEMIN6Q8WXD5 167 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC45A3Q96JT2 553 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 MAGEH1Q9H213 219 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZBTB20Q9HC78 741 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 CFAP97Q9P2B7 532 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 A0A1W2PRB8 838 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ELOA3DA6NLF2 546 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SSX5O60225 188 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 PCDH7O60245 1069 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 UPK1BO75841 260 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 PTTG1O95997 202 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 H1F0P07305 194 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC35G4P0C7Q5 338 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 RAB5BP61020 215 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SULT2A1Q06520 285 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 CBX2Q14781 532 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ELOA3BQ3SY89 546 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 PNCKQ6P2M8 343 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SNX20Q7Z614 316 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 VTCN1Q7Z7D3 282 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 MMAAQ8IVH4 418 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 ELOA3Q8NG57 546 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 SETD6Q8TBK2 473 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 TCEAL4Q96EI5 215 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 CPNE2Q96FN4 548 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 FIZ1Q96SL8 496 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 MAPKAP1Q9BPZ7 522 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 CPNE5Q9HCH3 593 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 THG1LQ9NWX6 298 aaKnown RBP9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 TAS2R10Q9NYW0 307 aa9.46□□□□□ -0.9
CTDSPL2-201ENST00000260327 MEMO1Q9Y316 297 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms