RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 CTSCP53634 463 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 IRF5Q13568 498 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 GPR33Q49SQ1 333 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 MEX3DQ86XN8 651 aaKnown RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 CCDC71Q8IV32 467 aaPredicted RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 LGI4Q8N135 537 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 PJA1Q8NG27 643 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 RDH12Q96NR8 316 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SAMD11Q96NU1 681 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SMAD5Q99717 465 aaKnown RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 HCFC1R1Q9NWW0 138 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 MYO9BQ13459 2157 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 CNOT3O75175 753 aaKnown RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 LRG1P02750 347 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 PTNP21246 168 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SLC19A1P41440 591 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 NRIP1P48552 1158 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 CBX2Q14781 532 aaPredicted RBP13.03□□□□□ -0.32
VHL-201ENST00000256474 ARSIQ5FYB1 569 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 FAM26DQ5JW98 314 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SLC8B1Q6J4K2 584 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 CFAP206Q8IYR0 622 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 ENTHD1Q8IYW4 607 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 DSN1Q9H410 356 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 GIN1Q9NXP7 522 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 POU2F3Q9UKI9 436 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 PMF1-BGLAPU3KQ54 211 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 ARHGEF33A8MVX0 844 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 TFECO14948 347 aaPredicted RBP13.02□□□□□ -0.32
VHL-201ENST00000256474 CD6P30203 668 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 RCVRNP35243 200 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 C2orf80Q0P641 193 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 LEXMQ3ZCV2 418 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 C6orf183Q5T699 404 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 HSD11B1LQ7Z5J1 315 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 VPS35Q96QK1 796 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 NIPSNAP1Q9BPW8 284 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 SLC29A3Q9BZD2 475 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 HMX1Q9NP08 348 aaPredicted RBP13.02□□□□□ -0.32
VHL-201ENST00000256474 RNF6Q9Y252 685 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 INSL5Q9Y5Q6 135 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 ANKRD36A6QL64 1941 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 PTPRDP23468 1912 aa13.02□□□□□ -0.32
VHL-201ENST00000256474 A6NL46 340 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 PSMD11O00231 422 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 RTCAO00442 366 aaKnown RBP13.02□□□□□ -0.33
VHL-201ENST00000256474 TLL1O43897 1013 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 HOXA9P31269 272 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 EXOC3L2Q2M3D2 409 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 C22orf39Q6P5X5 142 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 OLIG3Q7RTU3 272 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 PTOV1Q86YD1 416 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 HUS1BQ8NHY5 278 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 CSGALNACT1Q8TDX6 532 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 IL17FQ96PD4 163 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 LINC00597Q9H2U6 94 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 SLC25A13Q9UJS0 675 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 NRG2O14511 850 aaPredicted RBP13.02□□□□□ -0.33
VHL-201ENST00000256474 GABARAPL2P60520 117 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 GPNMBQ14956 572 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 TAB1Q15750 504 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 TMEM220Q6QAJ8 160 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 ZNF740Q8NDX6 193 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 ASZ1Q8WWH4 475 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 ASB11Q8WXH4 323 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 RAB8BQ92930 207 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 SCRN2Q96FV2 425 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 DOCK6Q96HP0 2047 aa13.02□□□□□ -0.33
VHL-201ENST00000256474 C9P02748 559 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 SLC10A3P09131 477 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 C1SP09871 688 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 NR4A2P43354 598 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 CSNK1DP48730 415 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ST3GAL4Q11206 333 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 TRIM60Q495X7 471 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ARMCX4Q5H9R4 360 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 GAREM2Q75VX8 874 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 BCDIN3DQ7Z5W3 292 aaKnown RBP13.01□□□□□ -0.33
VHL-201ENST00000256474 ADCK2Q7Z695 626 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 RNF130Q86XS8 419 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 SLC35A5Q9BS91 424 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 OR51B4Q9Y5P0 310 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 MICAL3Q7RTP6 2002 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 GFRA2O00451 464 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ZNF197O14709 1029 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 SNPHO15079 494 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 GABARAPO95166 117 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 KLK1P06870 262 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 RPS3P23396 243 aaKnown RBP eCLIP13.01□□□□□ -0.33
VHL-201ENST00000256474 SPINT3P49223 89 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 PFN3P60673 137 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ZNF284Q2VY69 593 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 C5orf22Q49AR2 442 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 LRRC70Q7Z2Q7 622 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 GATAD2AQ86YP4 633 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms