RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TNFSF13BQ9Y275 285 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 MRPS33Q9Y291 106 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 NRCAMQ92823 1304 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 CHD2O14647 1828 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 KRBOX1C9JBD0 128 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 SNAPINO95295 136 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ALDH2P05091 517 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ATP5C1P36542 298 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 FXYD6P3P58550 94 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF460Q14592 562 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 PRAMEF13Q5VWM6 474 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 MED27Q6P2C8 311 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 TIFABQ6ZNK6 161 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR9I1Q8NGQ6 314 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 EXOSC8Q96B26 276 aaKnown RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 TM6SF2Q9BZW4 377 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 MS4A12Q9NXJ0 267 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 PCDHGB2Q9Y5G2 931 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 B4GALT5O43286 388 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 HOXA2O43364 376 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC34A2O95436 690 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 RETP07949 1114 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF705DP0CH99 300 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF705BP0CI00 300 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 CELP19835 753 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 RAB5CP51148 216 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 IDH3GP51553 393 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 XKR4Q5GH76 650 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC22A10Q63ZE4 541 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 PAPD4Q6PIY7 484 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 CHDHQ8NE62 594 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR4K3Q96R72 315 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZDHHC7Q9NXF8 308 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 CNTN3Q9P232 1028 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 A0A0G2JMP0 313 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 CIB4A0PJX0 185 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 EIF1AYO14602 144 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SMAD9O15198 467 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 AQP9O43315 295 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 MT-ND5P03915 603 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 GTF2F2P13984 249 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 GJA1P17302 382 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 PROZP22891 400 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ARL3P36405 182 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 RBMXP38159 391 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 GRK6P43250 576 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ALDH3B1P43353 468 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 MAP2K5Q13163 448 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 NPY5RQ15761 445 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 CLEC12AQ5QGZ9 265 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ATXN7L2Q5T6C5 722 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 LCLAT1Q6UWP7 414 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 PLPPR4Q7Z2D5 763 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 LDB1Q86U70 411 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 C12orf45Q8N5I9 185 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 AQP11Q8NBQ7 271 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR4M2Q8NGB6 313 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 OR5T2Q8NGG2 359 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 RIT1Q92963 219 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 TMIGD2Q96BF3 282 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 PTPRJQ12913 1337 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 TEX13CA0A0J9YWL9 993 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 A8MT66 165 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 DLX3O60479 287 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ESR1P03372 595 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ZNF823P16415 610 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ATP4BP51164 291 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 NDST2P52849 883 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 INHBEP58166 350 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 PIGFQ07326 219 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 LRRC70Q7Z2Q7 622 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 LIN37Q96GY3 246 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SNX18Q96RF0 628 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ADAM2Q99965 735 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC25A51Q9H1U9 297 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 MRTO4Q9UKD2 239 aaKnown RBP12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 SLC1A7O00341 560 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 LYRM1O43325 122 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ECI2O75521 394 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 ENGP17813 658 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 IGFBP4P22692 258 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 DCKP27707 260 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 C14orf28Q4W4Y0 310 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 RGMBQ6NW40 437 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 HSDL2Q6YN16 418 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 C16orf59Q7L2K0 433 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 RELL1Q8IUW5 271 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 STK35Q8TDR2 534 aa12.78□□□□□ -0.36
PCDHGA3-201ENST00000253812 CHPT1Q8WUD6 406 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms