RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 HCN3Q9P1Z3 774 aa19.9■□□□□ 0.78
NEDD8-201ENST00000250495 ASIC3Q9UHC3 531 aa19.9■□□□□ 0.78
NEDD8-201ENST00000250495 OR5H15A6NDH6 313 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 A8MUI8 341 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 SGK494L7N484 410 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 LCMT2O60294 686 aaKnown RBP19.89■□□□□ 0.77
NEDD8-201ENST00000250495 SEC24DO94855 1032 aaPredicted RBP19.89■□□□□ 0.77
NEDD8-201ENST00000250495 RASAL1O95294 804 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 NPPBP16860 134 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 IL10P22301 178 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 IL2P60568 153 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 SNRPNP63162 240 aaKnown RBP19.89■□□□□ 0.77
NEDD8-201ENST00000250495 BTBD16Q32M84 506 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 PLAG1Q6DJT9 500 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 MBOAT1Q6ZNC8 495 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 GALNT7Q86SF2 657 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 SLC26A11Q86WA9 606 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 CNTN4Q8IWV2 1026 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 CPAMD8Q8IZJ3 1885 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 MFSD9Q8NBP5 474 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 KCT2Q8NC54 265 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 LINGO1Q96FE5 620 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 ZNF354BQ96LW1 612 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 SLC22A7Q9Y694 548 aa19.89■□□□□ 0.77
NEDD8-201ENST00000250495 IGHV3-20A0A0C4DH32 117 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 ZSCAN12O43309 604 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 PRAMEF2O60811 474 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 SLC35G6P0C7Q6 338 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 CDH1P12830 882 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 TDGF1P3P51864 188 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 CDKN2DP55273 166 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 PDAP1Q13442 181 aaKnown RBP19.88■□□□□ 0.77
NEDD8-201ENST00000250495 RBM20Q5T481 1227 aaKnown RBP19.88■□□□□ 0.77
NEDD8-201ENST00000250495 DUPD1Q68J44 220 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 LANCL3Q6ZV70 420 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 FJX1Q86VR8 437 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 ABHD11Q8NFV4 315 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 ZCCHC10Q8TBK6 192 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 RELTQ969Z4 430 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 CERS2Q96G23 380 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 PPANQ9NQ55 473 aaKnown RBP19.88■□□□□ 0.77
NEDD8-201ENST00000250495 ARL15Q9NXU5 204 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 ABI3Q9P2A4 366 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 SNX12Q9UMY4 172 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 SH2B3Q9UQQ2 575 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 MYO7BQ6PIF6 2116 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 CENPEQ02224 2701 aa19.88■□□□□ 0.77
NEDD8-201ENST00000250495 CREBBPQ92793 2442 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 ZG16O60844 167 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 CCR8P51685 355 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 AP1S2P56377 157 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 HERC3Q15034 1050 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 EXT1Q16394 746 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 PHKG1Q16816 387 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 BBS9Q3SYG4 887 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 H3F3CQ6NXT2 135 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 GFRALQ6UXV0 394 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 ANKRD37Q7Z713 158 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 TBC1D19Q8N5T2 526 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 PLPP5Q8NEB5 264 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 ATL1Q8WXF7 558 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 SLCO2A1Q92959 643 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 SNF8Q96H20 258 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 SARGQ9BW04 601 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 KCNK13Q9HB14 408 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 CORO1CQ9ULV4 474 aaPredicted RBP19.87■□□□□ 0.77
NEDD8-201ENST00000250495 VWA7Q9Y334 891 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 NAALAD2Q9Y3Q0 740 aa19.87■□□□□ 0.77
NEDD8-201ENST00000250495 ITPR2Q14571 2701 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 RDH16O75452 317 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 BANF1O75531 89 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 KCNK10P57789 538 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 SKP1P63208 163 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 ACTN3Q08043 901 aaPredicted RBP19.86■□□□□ 0.77
NEDD8-201ENST00000250495 NSDHLQ15738 373 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 MSS51Q4VC12 460 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 TEDDM1Q5T9Z0 273 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 C1QL3Q5VWW1 255 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 NIPAL1Q6NVV3 410 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 PDSS2Q86YH6 399 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 PDIK1LQ8N165 341 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 AMER2Q8N7J2 671 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 OR4K1Q8NGD4 311 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 OR56A3Q8NH54 315 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 M1APQ8TC57 530 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 OR1F2PQ96R84 312 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 DDX47Q9H0S4 455 aaKnown RBP19.86■□□□□ 0.77
NEDD8-201ENST00000250495 CROCCQ5TZA2 2017 aa19.86■□□□□ 0.77
NEDD8-201ENST00000250495 OR2W5A6NFC9 320 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 OR1F1O43749 312 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 TSPAN12O95859 305 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 PWP1Q13610 501 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 MEP1AQ16819 746 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 ACER2Q5QJU3 275 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 HECTD2Q5U5R9 776 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 TMEM207Q6UWW9 146 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 IGDCC3Q8IVU1 814 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 SHISA5Q8N114 240 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 GPATCH11Q8N954 259 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 PYCR2Q96C36 320 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms