RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 HEPHQ9BQS7 1158 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 CORO1BQ9BR76 489 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 RIOK2Q9BVS4 552 aaKnown RBP15.83■□□□□ 0.12
HOXD3-201ENST00000249440 MCOLN1Q9GZU1 580 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 RC3H2Q9HBD1 1191 aaKnown RBP15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ASAH2Q9NR71 780 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 RASSF1Q9NS23 344 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 CCL26Q9Y258 94 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 PADI2Q9Y2J8 665 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 PCDHGB3Q9Y5G1 929 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 FADS2P1A8MWK0 482 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 KPNA4O00629 521 aaPredicted RBP15.83■□□□□ 0.12
HOXD3-201ENST00000249440 TSPAN6O43657 245 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ATG13O75143 517 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ETHE1O95571 254 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 FADS2O95864 444 aaKnown RBP15.83■□□□□ 0.12
HOXD3-201ENST00000249440 NUDT7P0C024 238 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 MAPK9P45984 424 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 MASP1P48740 699 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 BCAP31P51572 246 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 HKDC1Q2TB90 917 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ZNF284Q2VY69 593 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ZNF648Q5T619 568 aaPredicted RBP15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ZNF557Q8N988 423 aaPredicted RBP15.83■□□□□ 0.12
HOXD3-201ENST00000249440 OR7G3Q8NG95 312 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ZFP90Q8TF47 636 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 BTN2A2Q8WVV5 523 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 COQ8BQ96D53 544 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 FAM210AQ96ND0 272 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 DOHHQ9BU89 302 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 ZNF282Q9UDV7 671 aaPredicted RBP15.83■□□□□ 0.12
HOXD3-201ENST00000249440 VPS4AQ9UN37 437 aa15.83■□□□□ 0.12
HOXD3-201ENST00000249440 DOCK6Q96HP0 2047 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 GNG14A0A1W2PPG7 69 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 AXIN1O15169 862 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 LEFTY1O75610 366 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 SLC16A8O95907 504 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 FUCA1P04066 466 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 PORP16435 677 aaPredicted RBP15.82■□□□□ 0.12
HOXD3-201ENST00000249440 EN2P19622 333 aaPredicted RBP15.82■□□□□ 0.12
HOXD3-201ENST00000249440 IDSP22304 550 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 ITGB8P26012 769 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 KCNC4Q03721 635 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 TLE2Q04725 743 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 LRRC26Q2I0M4 334 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 EGFLAMQ63HQ2 1017 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 SLC39A5Q6ZMH5 540 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 C11orf65Q8NCR3 313 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 OR56A3Q8NH54 315 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 HUS1BQ8NHY5 278 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 NDNFQ8TB73 568 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 CHTF18Q8WVB6 975 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 HRASLS5Q96KN8 279 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 FOPNLQ96NB1 174 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 ZNF300Q96RE9 604 aaPredicted RBP15.82■□□□□ 0.12
HOXD3-201ENST00000249440 AKIP1Q9NQ31 210 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 NFKBIL1Q9UBC1 381 aaPredicted RBP15.82■□□□□ 0.12
HOXD3-201ENST00000249440 PCM1Q15154 2024 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 RNASET2O00584 256 aaKnown RBP15.82■□□□□ 0.12
HOXD3-201ENST00000249440 NTRK1P04629 796 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 IMPA1P29218 277 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 RRM2P31350 389 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 PPM1AP35813 382 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 KRT20P35900 424 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 GJA8P48165 433 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 VBP1P61758 197 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 LSM3P62310 102 aaKnown RBP15.82■□□□□ 0.12
HOXD3-201ENST00000249440 DMC1Q14565 340 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 TRIM16LQ309B1 348 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 CCSMST1Q4G0I0 132 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 ADIPOR2Q86V24 386 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 MAL2Q969L2 176 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 RHNO1Q9BSD3 238 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 EPS8L2Q9H6S3 715 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 SIRT5Q9NXA8 310 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 SH3BP4Q9P0V3 963 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 KCNE2Q9Y6J6 123 aa15.82■□□□□ 0.12
HOXD3-201ENST00000249440 TOR1BO14657 336 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 PCDHGA12O60330 932 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 SH3BGRLO75368 114 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 NADKO95544 446 aaPredicted RBP15.81■□□□□ 0.12
HOXD3-201ENST00000249440 CTSAP10619 480 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 AQP1P29972 269 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 PCGF2P35227 344 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 GRK3P35626 688 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 PREPP48147 710 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 CRYBA2P53672 197 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 SELENOWP63302 87 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 RELAQ04206 551 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 ARSIQ5FYB1 569 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 ADNP2Q6IQ32 1131 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 ADCK1Q86TW2 530 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 CCDC71Q8IV32 467 aaPredicted RBP15.81■□□□□ 0.12
HOXD3-201ENST00000249440 P3H2Q8IVL5 708 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 NAGSQ8N159 534 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 RASGEF1AQ8N9B8 481 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 IRF7Q92985 503 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 REPS1Q96D71 796 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 CXorf40BQ96DE9 158 aa15.81■□□□□ 0.12
HOXD3-201ENST00000249440 VPS35Q96QK1 796 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms