RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 KRT78Q8N1N4 520 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 VPS50Q96JG6 964 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 PHF12Q96QT6 1004 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 APOOQ9BUR5 198 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 ANKRD60Q9BZ19 345 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 OSGEPL1Q9H4B0 414 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 RMI1Q9H9A7 625 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 ATP6V1HQ9UI12 483 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 KCNK6Q9Y257 313 aa17.76■□□□□ 0.43
HOXC11-201ENST00000243082 PLOD2O00469 737 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 PRKD3O94806 890 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 EPN2O95208 641 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 ZNF385BQ569K4 471 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 LINC01555Q8NAE3 123 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 SMPDL3AQ92484 453 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 NCLNQ969V3 563 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 C12orf66Q96MD2 445 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 FERD3LQ96RJ6 166 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 MYCBPQ99417 103 aaPredicted RBP17.75■□□□□ 0.43
HOXC11-201ENST00000243082 PRPF18Q99633 342 aaKnown RBP17.75■□□□□ 0.43
HOXC11-201ENST00000243082 ZNF696Q9H7X3 374 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 PELI2Q9HAT8 420 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 PREBQ9HCU5 417 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 WASH6PQ9NQA3 447 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 CUEDC1Q9NWM3 386 aaPredicted RBP17.75■□□□□ 0.43
HOXC11-201ENST00000243082 UTS2RQ9UKP6 389 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 PCDHB11Q9Y5F2 797 aa17.75■□□□□ 0.43
HOXC11-201ENST00000243082 MAP3K13O43283 966 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 DEAF1O75398 565 aaPredicted RBP17.74■□□□□ 0.43
HOXC11-201ENST00000243082 TNFAIP8O95379 198 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 TBX6O95947 436 aaPredicted RBP17.74■□□□□ 0.43
HOXC11-201ENST00000243082 PTX3P26022 381 aaPredicted RBP17.74■□□□□ 0.43
HOXC11-201ENST00000243082 PSMB5P28074 263 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 CLCN2P51788 898 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 PPP2CBP62714 309 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 PPP2CAP67775 309 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 RBBP5Q15291 538 aaKnown RBP17.74■□□□□ 0.43
HOXC11-201ENST00000243082 ANXA8L1Q5VT79 327 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 IYDQ6PHW0 289 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 TBPL2Q6SJ96 375 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 ABHD11Q8NFV4 315 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 C16orf78Q8WTQ4 265 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 CXorf40BQ96DE9 158 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 SLC47A1Q96FL8 570 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 NECTIN4Q96NY8 510 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 C1QTNF7Q9BXJ2 289 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 RHBGQ9H310 441 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 ZNF576Q9H609 170 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 REEP4Q9H6H4 257 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 OLAHQ9NV23 265 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 SH3BP4Q9P0V3 963 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 SUFUQ9UMX1 484 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 PIAS3Q9Y6X2 628 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 C1orf226A1L170 272 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 SLC31A1O15431 190 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 KCNK5O95279 499 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 SERPINA1P01009 418 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 C7P10643 843 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 IL1RNP18510 177 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 PHEXP78562 749 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 CLCA4Q14CN2 919 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 ANKRD53Q8N9V6 530 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 VPS37AQ8NEZ2 397 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 SIPA1Q96FS4 1042 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 MYOCQ99972 504 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 PCBD2Q9H0N5 130 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 AASDHPPTQ9NRN7 309 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 SCML1Q9UN30 329 aa17.74■□□□□ 0.43
HOXC11-201ENST00000243082 EYSQ5T1H1 3165 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 RNASET2O00584 256 aaKnown RBP17.73■□□□□ 0.43
HOXC11-201ENST00000243082 KLK1P06870 262 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 ZNF23P17027 643 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 MC1RQ01726 317 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 MERTKQ12866 999 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 PDE7AQ13946 482 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 FAM71E1Q6IPT2 247 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 TMEM214Q6NUQ4 689 aaKnown RBP17.73■□□□□ 0.43
HOXC11-201ENST00000243082 ZCCHC8Q6NZY4 707 aaKnown RBP17.73■□□□□ 0.43
HOXC11-201ENST00000243082 PTOV1Q86YD1 416 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 ZZZ3Q8IYH5 903 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 TDHQ8IZJ6 230 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 SNX19Q92543 992 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 CAMK1GQ96NX5 476 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 ADI1Q9BV57 179 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 BHLHE41Q9C0J9 482 aaPredicted RBP17.73■□□□□ 0.43
HOXC11-201ENST00000243082 TPT1P8Q9HAU6 139 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 MYNNQ9NPC7 610 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 FZD4Q9ULV1 537 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 GMEB1Q9Y692 573 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 COL4A2P08572 1712 aa17.73■□□□□ 0.43
HOXC11-201ENST00000243082 MYOCOSA0A1B0GUC4 107 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 FURINP09958 794 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 DRD1P21728 446 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 ADRM1Q16186 407 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 CPZQ66K79 652 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 SLC9B2Q86UD5 537 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 FAM124AQ86V42 546 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 OR4K1Q8NGD4 311 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 TMBIM1Q969X1 311 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms