RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 DNAJA1P31689 397 aaKnown RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 SLC1A2P43004 574 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 SMSP52788 366 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 NUDT6P53370 316 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 DSG2Q14126 1118 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 MED22Q15528 200 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 HES5Q5TA89 166 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 LUZP2Q86TE4 346 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PAQR7Q86WK9 346 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 TMEM132CQ8N3T6 1108 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 GMCL1P1Q8NEA9 526 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 ULK4Q96C45 1275 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 RGS18Q9NS28 235 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 TAS2R16Q9NYV7 291 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 ASB4Q9Y574 426 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 A0A087WZ62 844 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 TCRBV16S1A1N1A0A5B0 115 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PDCD5O14737 125 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 SERPINA1P01009 418 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 ATXN1P54253 815 aaKnown RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 OSTNP61366 133 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PTPRCAPQ14761 206 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 HSDL2Q6YN16 418 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 GCNT7Q6ZNI0 430 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 SPATA2LQ8IUW3 424 aaPredicted RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 C2CD4AQ8NCU7 369 aaPredicted RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 MNTQ99583 582 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 MND1Q9BWT6 205 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 CDCA4Q9BXL8 241 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 CDCP1Q9H5V8 836 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 ALG9Q9H6U8 611 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 HHATLQ9HCP6 504 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 IKZF3Q9UKT9 509 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 MRPL11Q9Y3B7 192 aaKnown RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 SCN9AQ15858 1988 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PRAMEF33A0A0G2JMD5 474 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 GLYATL1P3A0A0U1RQE8 302 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 AIPO00170 330 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 KCNK1O00180 336 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PRAMEF10O60809 474 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 LPLP06858 475 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 ADRB1P08588 477 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 NMBP08949 121 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PTPN3P26045 913 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 NNMTP40261 264 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 CRYBB2P43320 205 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 ATP12AP54707 1039 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PLD1Q13393 1074 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 CAMK2GQ13555 558 aaPredicted RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 GTF2H3Q13889 308 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 HFEQ30201 348 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 ZNF528Q3MIS6 628 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 ZNF628Q5EBL2 1059 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 FAM171A1Q5VUB5 890 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 SYPL2Q5VXT5 272 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 RGMBQ6NW40 437 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 FAHD1Q6P587 224 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 SLC44A2Q8IWA5 706 aaPredicted RBP12.59□□□□□ -0.39
MSH2-201ENST00000233146 TMEM43Q9BTV4 400 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 IKZF5Q9H5V7 419 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 EPHA6Q9UF33 1036 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 PADI2Q9Y2J8 665 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 GJA3Q9Y6H8 435 aa12.59□□□□□ -0.39
MSH2-201ENST00000233146 STRCP1A6NGW2 1772 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 SLC28A1O00337 649 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 GFRA2O00451 464 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 EIF3GO75821 320 aaKnown RBP eCLIP12.58□□□□□ -0.4
MSH2-201ENST00000233146 HTR3BO95264 441 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 PRAMEF1O95521 474 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 NOS2P35228 1153 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 RPL6Q02878 288 aaKnown RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 MADCAM1Q13477 382 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 SLC14A2Q15849 920 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 RTP2Q5QGT7 225 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 KANSL1Q7Z3B3 1105 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 HSD17B13Q7Z5P4 300 aaPredicted RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 ISCA2Q86U28 154 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 MCATQ8IVS2 390 aaKnown RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 ADGRF3Q8IZF5 1079 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 ADGRG2Q8IZP9 1017 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 NETO1Q8TDF5 533 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 SLC38A2Q96QD8 506 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 GABARAPL3Q9BY60 117 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 ELOVL4Q9GZR5 314 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 B3GAT2Q9NPZ5 323 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 GPN3Q9UHW5 284 aaPredicted RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 FBXL2Q9UKC9 423 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 MYO1GB0I1T2 1018 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 ADRA2AP08913 450 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 SMIM6P0DI80 62 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 PAMP19021 973 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 GGT2P36268 569 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 CRYZQ08257 329 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms