RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 RAP1GAP2Q684P5 730 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ARMCX2Q7L311 632 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 THAP5Q7Z6K1 395 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 DPPA2Q7Z7J5 298 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 C8orf59Q8N0T1 100 aaPredicted RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 AMER2Q8N7J2 671 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 NANOGP1Q8N7R0 232 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 C1orf127Q8N9H9 656 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CHST13Q8NET6 341 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CLHC1Q8NHS4 586 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 FAR1Q8WVX9 515 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ZNF566Q969W8 418 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 FUBP3Q96I24 572 aaKnown RBP eCLIP5.52□□□□□ -1.53
RFX4-201ENST00000229387 CEP41Q9BYV8 373 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 MIR1-1HGQ9H1L0 117 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 MIXL1Q9H2W2 232 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RNF121Q9H920 327 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RPF1Q9H9Y2 349 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 ZNF334Q9HCZ1 680 aaPredicted RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 ENTPD7Q9NQZ7 604 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 NUDT15Q9NV35 164 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 LYVE1Q9Y5Y7 322 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 U3KQV3 271 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 COL2A1P02458 1487 aaPredicted RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 A0A1W2PPL8 197 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 TCRBV7S3A2A0A539 114 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 H0YCG3 227 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 KCNK1O00180 336 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ARVCFO00192 962 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 TCAPO15273 167 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 DCXO43602 365 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 SOCS5O75159 536 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 STX11O75558 287 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 FGF2P09038 288 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 HOXC6P09630 235 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CLUP10909 449 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 MUC1P15941 1255 aaPredicted RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 MAGP20916 626 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CASP9P55211 416 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 PSMA6P60900 246 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 PEX6Q13608 980 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 EXOSC2Q13868 293 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 ZNF667Q5HYK9 610 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 FAM102AQ5T9C2 384 aaPredicted RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 ANKRD22Q5VYY1 191 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 OR5M10Q6IEU7 315 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 OR6B2Q6IFH4 312 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 EPGNQ6UW88 154 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 SLC16A13Q7RTY0 426 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ACOT1Q86TX2 421 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ANKRD46Q86W74 232 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ZFAND4Q86XD8 727 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 OFCC1Q8IZS5 231 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 C12orf45Q8N5I9 185 aaPredicted RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 NIPA2Q8N8Q9 360 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 WDSUB1Q8N9V3 476 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 SLC24A4Q8NFF2 622 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 OR6B3Q8NGW1 331 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 HTR3CQ8WXA8 447 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CPT1BQ92523 772 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 C12orf42Q96LP6 360 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 KCNA7Q96RP8 456 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 PFDN5Q99471 154 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CCDC86Q9H6F5 360 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 DUSP22Q9NRW4 184 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ERVK-18Q9QC07 812 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 XPR1Q9UBH6 696 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CPA4Q9UI42 421 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 SIX4Q9UIU6 781 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 PDE10AQ9Y233 779 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 TRBV23OR9-2A0A075B6M9 112 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RNF103-CHMP3A0A140T963 221 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ABHD14A-ACY1A0A1B0GW23 586 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RHPN2P1A8MT19 583 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 E7ESA3 106 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 UBE2CO00762 179 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 TO15178 435 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RAD1O60671 282 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 VAPBO95292 243 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RLN2P04090 185 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 JMJD7P0C870 316 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ELK4P28324 431 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 MSX1P28360 303 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CRABP1P29762 137 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 CD68P34810 354 aaPredicted RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 RPS9P46781 194 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 GNG10P50151 68 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ALDH3A2P51648 485 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 EPHA5P54756 1037 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 PKNOX1P55347 436 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 ERVK-25P63136 954 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RPL6Q02878 288 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 CSTF1Q05048 431 aaKnown RBP5.52□□□□□ -1.53
RFX4-201ENST00000229387 HIF1AQ16665 826 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 RFX4Q33E94 735 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 SLC10A6Q3KNW5 377 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 UAP1L1Q3KQV9 507 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 SPANXN2Q5MJ10 180 aa5.52□□□□□ -1.53
RFX4-201ENST00000229387 BSPRYQ5W0U4 402 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms