RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 SCELO95171 688 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 DNTTP04053 509 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 LYNP07948 512 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 ANXA6P08133 673 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CDH1P12830 882 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 IL1RNP18510 177 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 HRH2P25021 359 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TACR1P25103 407 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CTHP32929 405 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 RPL3P39023 403 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 FOXC1Q12948 553 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 SGCGQ13326 291 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 IRF4Q15306 451 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 PRAMEF14Q5SWL7 426 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 PRAMEF13Q5VWM6 474 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 NXPE4Q6UWF7 544 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 USP30Q70CQ3 517 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 RALGPS2Q86X27 583 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 MSRB3Q8IXL7 192 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 RAB42Q8N4Z0 105 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 DTWD1Q8N5C7 304 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 FOXJ1Q92949 421 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 MTERF1Q99551 399 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 PRPF18Q99633 342 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CPPED1Q9BRF8 314 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 C9orf16Q9BUW7 83 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 THUMPD3Q9BV44 507 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 OSBPL11Q9BXB4 747 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 RPF2Q9H7B2 306 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 KAT8Q9H7Z6 458 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 ZDHHC4Q9NPG8 344 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 FBXL12Q9NXK8 326 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 SLC25A37Q9NYZ2 338 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 GMPR2Q9P2T1 348 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 ELOVL7A1L3X0 281 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 PIPSLA2A3N6 862 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 MAGEB17A8MXT2 336 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 RFXANKO14593 260 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TIPRLO75663 272 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 SLC35G4P0C7Q5 338 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 DRD1P21728 446 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CXCR2P25025 360 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CALRP27797 417 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 PTPN6P29350 595 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TIA1P31483 386 aaKnown RBP eCLIP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TIE1P35590 1138 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 HPCAL1P37235 193 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 WASP42768 502 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 OR4D2P58180 307 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 ABHD18Q0P651 414 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CYP2A13Q16696 494 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 PLA2G2CQ5R387 149 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TMTC4Q5T4D3 741 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 HMBOX1Q6NT76 420 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TMEM154Q6P9G4 183 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CALHM3Q86XJ0 350 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 KRT78Q8N1N4 520 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 CLHC1Q8NHS4 586 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 GAB3Q8WWW8 586 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 EZH1Q92800 747 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 SPATA9Q9BWV2 254 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 RAB11FIP5Q9BXF6 653 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 UGT2B28Q9BY64 529 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TRIT1Q9H3H1 467 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 C8orf33Q9H7E9 229 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 PELI2Q9HAT8 420 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 DMRT3Q9NQL9 472 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 SERGEFQ9UGK8 458 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
COPS7A-201ENST00000229251 INVSQ9Y283 1065 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 TMEM98Q9Y2Y6 226 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 AP4B1Q9Y6B7 739 aa12.62□□□□□ -0.39
COPS7A-201ENST00000229251 ASPMQ8IZT6 3477 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 CCDC163A0A0D9SF12 145 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 SCAMP2O15127 329 aaKnown RBP12.61□□□□□ -0.39
COPS7A-201ENST00000229251 HOXC4P09017 264 aaPredicted RBP12.61□□□□□ -0.39
COPS7A-201ENST00000229251 RAP2AP10114 183 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 MTHFD1P11586 935 aaKnown RBP12.61□□□□□ -0.39
COPS7A-201ENST00000229251 OXTRP30559 389 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 SOX9P48436 509 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 CCT8P50990 548 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 CHN2P52757 468 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 PHC1P78364 1004 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 MRPS21P82921 87 aaKnown RBP12.61□□□□□ -0.39
COPS7A-201ENST00000229251 SELPLGQ14242 412 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 SLBPQ14493 270 aaKnown RBP eCLIP12.61□□□□□ -0.39
COPS7A-201ENST00000229251 PDK3Q15120 406 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 ATP6AP1Q15904 470 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 DUOXA1Q1HG43 343 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 PLA2G4EQ3MJ16 856 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 FAM98BQ52LJ0 330 aaKnown RBP12.61□□□□□ -0.39
COPS7A-201ENST00000229251 TMEM196Q5HYL7 178 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 ANXA8L1Q5VT79 327 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 CAPRIN2Q6IMN6 1127 aaKnown RBP12.61□□□□□ -0.39
COPS7A-201ENST00000229251 DOK6Q6PKX4 331 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 ZBTB49Q6ZSB9 765 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 SERPINA11Q86U17 422 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 MFSD2AQ8NA29 543 aa12.61□□□□□ -0.39
COPS7A-201ENST00000229251 VPS37AQ8NEZ2 397 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms