RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 DTD2Q96FN9 168 aa21.18■□□□□ 0.98
SMARCD2-201ENST00000225742 FAIMQ9NVQ4 179 aa21.18■□□□□ 0.98
SMARCD2-201ENST00000225742 KIF17Q9P2E2 1029 aa21.18■□□□□ 0.98
SMARCD2-201ENST00000225742 FAM8A1Q9UBU6 413 aa21.18■□□□□ 0.98
SMARCD2-201ENST00000225742 PCDHGB3Q9Y5G1 929 aa21.18■□□□□ 0.98
SMARCD2-201ENST00000225742 PCDH7O60245 1069 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 GP2P55259 537 aaKnown RBP21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 SLC35A2P78381 396 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 EMX1Q04741 257 aaPredicted RBP21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 HIST2H2ACQ16777 129 aaPredicted RBP21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 HKDC1Q2TB90 917 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 IQCCQ4KMZ1 466 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 HIST2H2AA3Q6FI13 130 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 PDE12Q6L8Q7 609 aaKnown RBP21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 XKR5Q6UX68 686 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 SLC16A12Q6ZSM3 486 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 LAS2Q8IYD9 372 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 KIAA1958Q8N8K9 716 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 NAT16Q8N8M0 369 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 IPCEF1Q8WWN9 437 aaPredicted RBP21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 SORCS1Q8WY21 1168 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 RORBQ92753 470 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 C7orf34Q96L11 122 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 DPH2Q9BQC3 489 aaPredicted RBP21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 REEP4Q9H6H4 257 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 THUMPD1Q9NXG2 353 aaKnown RBP21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 B3GNT3Q9Y2A9 372 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 WNT6Q9Y6F9 365 aa21.17■□□□□ 0.98
SMARCD2-201ENST00000225742 KIAA0355O15063 1070 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 BCAS1O75363 584 aaPredicted RBP21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 CISD3P0C7P0 127 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 PTX3P26022 381 aaPredicted RBP21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 HTR1BP28222 390 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 RANBP1P43487 201 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 ERVFC1P60507 584 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 RPS13P62277 151 aaKnown RBP21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 KCNJ10P78508 379 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 RBBP4Q09028 425 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 SIM2Q14190 667 aaPredicted RBP21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 PARS2Q7L3T8 475 aaKnown RBP21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 OR4A15Q8NGL6 344 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 PLEKHA8Q96JA3 519 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 DOHHQ9BU89 302 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 SGPP1Q9BX95 441 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 DGCR6LQ9BY27 220 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 CCDC90BQ9GZT6 254 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 ITM2CQ9NQX7 267 aa21.16■□□□□ 0.98
SMARCD2-201ENST00000225742 GNG14A0A1W2PPG7 69 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 C1QCP02747 245 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 PRNPP04156 253 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 HNRNPA1P09651 372 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 C1GALT1C1LP0DN25 315 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ITGB8P26012 769 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ACVR2AP27037 513 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ST8SIA6P61647 398 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 PIGFQ07326 219 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ZNF763Q0D2J5 394 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 MAD2L1BPQ15013 274 aaPredicted RBP21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 NPTX1Q15818 432 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 PRSS36Q5K4E3 855 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ATG16L2Q8NAA4 619 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 SMYD1Q8NB12 490 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ZNF480Q8WV37 535 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 MYLIPQ8WY64 445 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 NEIL2Q969S2 332 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 TSC22D4Q9Y3Q8 395 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 hCG_2014768A0A024R1R8 64 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 XYLBO75191 536 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 INMTO95050 263 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ACRP10323 421 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 DGKGP49619 791 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 BMXP51813 675 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 MAPK10P53779 464 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 TMPRSS11BQ86T26 416 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 LILRA3Q8N6C8 439 aaPredicted RBP21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 UBE2E3Q969T4 207 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 MTERF3Q96E29 417 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ZNF514Q96K75 400 aaPredicted RBP21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ZNF347Q96SE7 839 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 GABARAPL3Q9BY60 117 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 EXD2Q9NVH0 621 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 ERVK-18Q9QC07 812 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 PCDHGA10Q9Y5H3 936 aa21.15■□□□□ 0.98
SMARCD2-201ENST00000225742 TRIM43BA6NCK2 446 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 HIDE1A8MVS5 230 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 SLC22A1O15245 554 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 XPNPEP2O43895 674 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 CBFA2T3O75081 653 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 RFPL2O75678 378 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 GABARAPO95166 117 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 PDHA2P29803 388 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 TBPL1P62380 186 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 PHEXP78562 749 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 IL1RL1Q01638 556 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 FCHO2Q0JRZ9 810 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 ELP6Q0PNE2 266 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 PDE7AQ13946 482 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 PROX2Q3B8N5 592 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 SYT6Q5T7P8 510 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms