RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PADI2Q9Y2J8 665 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 KCNMB2Q9Y691 235 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 PCSK5Q92824 1860 aa12.06□□□□□ -0.48
LSM5-201ENST00000223084 SCN2AQ99250 2005 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 SYCE1LA8MT33 242 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 RFPL1O75677 317 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 IPO13O94829 963 aaKnown RBP12.05□□□□□ -0.48
LSM5-201ENST00000223084 RECKO95980 971 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 UMODP07911 640 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 C1GALT1C1LP0DN25 315 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 IL1RNP18510 177 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 GNAZP19086 355 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 EPORP19235 508 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 FBLP22087 321 aaKnown RBP12.05□□□□□ -0.48
LSM5-201ENST00000223084 FOLR3P41439 243 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 CCR10P46092 362 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 POLE2P56282 527 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 MAT1AQ00266 395 aaKnown RBP12.05□□□□□ -0.48
LSM5-201ENST00000223084 CHAF1BQ13112 559 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 PDK4Q16654 411 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 NDUFA9Q16795 377 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 PFKFB4Q16877 469 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 SYT16Q17RD7 645 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 TECRLQ5HYJ1 363 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 LGSNQ5TDP6 509 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 GARNL3Q5VVW2 1013 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 CPZQ66K79 652 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 TMEM214Q6NUQ4 689 aaKnown RBP12.05□□□□□ -0.48
LSM5-201ENST00000223084 PRMT9Q6P2P2 845 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 AMER3Q8N944 861 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 ANKRD53Q8N9V6 530 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 OR9A4Q8NGU2 314 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 OR2Y1Q8NGV0 311 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 APOBEC4Q8WW27 367 aaKnown RBP12.05□□□□□ -0.48
LSM5-201ENST00000223084 FKBP10Q96AY3 582 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 SARGQ9BW04 601 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 DRC3Q9H069 523 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 CPSF2Q9P2I0 782 aaKnown RBP12.05□□□□□ -0.48
LSM5-201ENST00000223084 TBK1Q9UHD2 729 aa12.05□□□□□ -0.48
LSM5-201ENST00000223084 ARGFXA6NJG6 315 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 SMIM23A6NLE4 172 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 FOXO6A8MYZ6 492 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 MASP2O00187 686 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 CLGNO14967 610 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 NDUFS4O43181 175 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 H2AFYO75367 372 aaKnown RBP12.04□□□□□ -0.48
LSM5-201ENST00000223084 DNAJB5O75953 348 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 B3GALT4O96024 378 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 ALBP02768 609 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 GFAPP14136 432 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 SLCO1A2P46721 670 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 ATP1A4Q13733 1029 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 FAM53BQ14153 422 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 DOC2AQ14183 400 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 SLBPQ14493 270 aaKnown RBP eCLIP12.04□□□□□ -0.48
LSM5-201ENST00000223084 SSPNQ14714 243 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 VWA2Q5GFL6 755 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 XKR6Q5GH73 641 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 ATG9BQ674R7 924 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 TIFABQ6ZNK6 161 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 LRRC70Q7Z2Q7 622 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 TBC1D19Q8N5T2 526 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 STT3BQ8TCJ2 826 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 UBTD2Q8WUN7 234 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 THAP4Q8WY91 577 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 WBP1Q96G27 269 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 SPSB2Q99619 263 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 CCDC77Q9BR77 488 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 TRIM55Q9BYV6 548 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 SLC26A1Q9H2B4 701 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 GPRC5BQ9NZH0 403 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 PSMC3IPQ9P2W1 217 aaPredicted RBP12.04□□□□□ -0.48
LSM5-201ENST00000223084 TRPC4Q9UBN4 977 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 ZFP69BQ9UJL9 534 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 CDC14AQ9UNH5 594 aa12.04□□□□□ -0.48
LSM5-201ENST00000223084 UNC79Q9P2D8 2635 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 IQANK1A0A1B0GTG1 560 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 ZNF860A6NHJ4 632 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 VSTM2BA6NLU5 285 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 SGK494L7N484 410 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 KLK8O60259 260 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 SIX3O95343 332 aaPredicted RBP12.03□□□□□ -0.48
LSM5-201ENST00000223084 CD63P08962 238 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 RBP1P09455 135 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 ZGLP1P0C6A0 271 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 SLC35G6P0C7Q6 338 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 COL6A2P12110 1019 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 CD22P20273 847 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 AHRP35869 848 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 HSD17B3P37058 310 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 HNF4AP41235 474 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 AVPR1BP47901 424 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 OCA2Q04671 838 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 KLC1Q07866 573 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 CHIT1Q13231 466 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 DSG2Q14126 1118 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms