RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TRAPPC5Q8IUR0 188 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 FAM9CQ8IZT9 166 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 ZNF740Q8NDX6 193 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 BTN2A2Q8WVV5 523 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 HHIPL1Q96JK4 782 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 TCF25Q9BQ70 676 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 ENPP5Q9UJA9 477 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 PLAGL1Q9UM63 463 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 SCAMP2O15127 329 aaKnown RBP14.09□□□□□ -0.15
CNOT3-201ENST00000221232 SUV39H1O43463 412 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 CYP2A6P11509 494 aaPredicted RBP14.09□□□□□ -0.15
CNOT3-201ENST00000221232 FPR1P21462 350 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 CYP2A13Q16696 494 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 CDKL4Q5MAI5 379 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 MFSD4BQ5TF39 518 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 EIF3MQ7L2H7 374 aaKnown RBP14.09□□□□□ -0.15
CNOT3-201ENST00000221232 ZFP90Q8TF47 636 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 COX4I2Q96KJ9 171 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 IL17FQ96PD4 163 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 RLIMQ9NVW2 624 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 ANTXRLA6NF34 631 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 J3KTA2 159 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 PCDHGA12O60330 932 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 ARHGEF15O94989 841 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 NADKO95544 446 aaPredicted RBP14.08□□□□□ -0.15
CNOT3-201ENST00000221232 C6orf47O95873 294 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 CATP04040 527 aaKnown RBP14.08□□□□□ -0.15
CNOT3-201ENST00000221232 GSTM1P09488 218 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 SYN1P17600 705 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 KRT20P35900 424 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 NNMTP40261 264 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 GSTM4Q03013 218 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 RGNQ15493 299 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 RFX4Q33E94 735 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 BRAT1Q6PJG6 821 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 CBLL1Q75N03 491 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 ANKRD33Q7Z3H0 272 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 TRMT11Q7Z4G4 463 aaKnown RBP14.08□□□□□ -0.15
CNOT3-201ENST00000221232 CACUL1Q86Y37 369 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 WDR48Q8TAF3 677 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 GLYATL1Q969I3 302 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 ZBP1Q9H171 429 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 OR2AG1Q9H205 316 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 SPATA6Q9NWH7 488 aaPredicted RBP14.08□□□□□ -0.15
CNOT3-201ENST00000221232 KLHL42Q9P2K6 505 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 TPRKBQ9Y3C4 175 aa14.08□□□□□ -0.15
CNOT3-201ENST00000221232 TRIM64BA6NI03 449 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 H3BM21 787 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 ATG13O75143 517 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 CTSAP10619 480 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 ITIH1P19827 911 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 IDSP22304 550 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 C21orf33P30042 268 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 IDH2P48735 452 aaKnown RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 GABARAPL2P60520 117 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 HBA1P69905 142 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 SLC44A2Q8IWA5 706 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 SETD9Q8NE22 299 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 PROX1Q92786 737 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 SH3YL1Q96HL8 342 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 CNDP2Q96KP4 475 aaKnown RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 APOL4Q9BPW4 351 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 SPNS1Q9H2V7 528 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 RHCGQ9UBD6 479 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 KPNA5O15131 536 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 PSIP1O75475 530 aaKnown RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 CCDC159P0C7I6 412 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 PRPH2P23942 346 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 CYP4F2P78329 520 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 KCNJ10P78508 379 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 NPRL3Q12980 569 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 SP140Q13342 867 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 COL9A2Q14055 689 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 CLCA4Q14CN2 919 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 LILRA6Q6PI73 481 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 VPS37AQ8NEZ2 397 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 OR8J2Q8NGG1 315 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 ZNF480Q8WV37 535 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 FEVQ99581 238 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 FAM120CQ9NX05 1096 aaKnown RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 IL36AQ9UHA7 158 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 EXO1Q9UQ84 846 aaKnown RBP14.08□□□□□ -0.16
CNOT3-201ENST00000221232 SH3GLB1Q9Y371 365 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 KCNE2Q9Y6J6 123 aa14.08□□□□□ -0.16
CNOT3-201ENST00000221232 SLC16A5O15375 505 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 GCM2O75603 506 aaPredicted RBP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 KLK1P06870 262 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 ITGAMP11215 1152 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 SOAT1P35610 550 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 SLC35A2P78381 396 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 CSTF3Q12996 717 aaKnown RBP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 SLBPQ14493 270 aaKnown RBP eCLIP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 MAD2L1BPQ15013 274 aaPredicted RBP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 KIAA1614Q5VZ46 1190 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 ZDHHC20Q5W0Z9 365 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 CCDC149Q6ZUS6 474 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 NPAS3Q8IXF0 933 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 UTP15Q8TED0 518 aaKnown RBP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 FOPNLQ96NB1 174 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms