RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CSTF3Q12996 717 aaKnown RBP16.66■□□□□ 0.26
USB1-201ENST00000219281 LIPJQ5W064 366 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 WDR20Q8TBZ3 569 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 GABARAPL3Q9BY60 117 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 CRISPLD2Q9H0B8 497 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 KLHL25Q9H0H3 589 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 ADPRHL2Q9NX46 363 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 TESMINQ9Y4I5 508 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 PCDHGB3Q9Y5G1 929 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 ANAPC1Q9H1A4 1944 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 GABRR3A8MPY1 467 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 E7EQ34 232 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 SCAMP2O15127 329 aaKnown RBP16.66■□□□□ 0.26
USB1-201ENST00000219281 GADD45AP24522 165 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 EIF2DP41214 584 aaKnown RBP16.66■□□□□ 0.26
USB1-201ENST00000219281 CSNK2BP67870 215 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 ACSM2AQ08AH3 577 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 ELP6Q0PNE2 266 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 SLC13A2Q13183 592 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 SP140Q13342 867 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 ZNF404Q494X3 552 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 COLEC12Q5KU26 742 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
USB1-201ENST00000219281 C1orf53Q5VUE5 145 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 ACSM2BQ68CK6 577 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 FAM124AQ86V42 546 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 CHST8Q9H2A9 424 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 SUV39H2Q9H5I1 410 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 PSORS1C1Q9UIG5 152 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 RUVBL1Q9Y265 456 aaKnown RBP16.66■□□□□ 0.26
USB1-201ENST00000219281 TMEM229AB2RXF0 380 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 SLC16A5O15375 505 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 RFPL2O75678 378 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 SRCP12931 536 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 TNFRSF1BP20333 461 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 AP1S2P56377 157 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 SNRPD1P62314 119 aaKnown RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 DOC2AQ14183 400 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 RGNQ15493 299 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 TIGD6Q17RP2 521 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 HKDC1Q2TB90 917 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 PLEKHS1Q5SXH7 462 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 CPTPQ5TA50 214 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 TSEN54Q7Z6J9 526 aaKnown RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 ARMC8Q8IUR7 673 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 NAGSQ8N159 534 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 SPPL2AQ8TCT8 520 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 FCGR1BQ92637 280 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 FEVQ99581 238 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 C6orf62Q9GZU0 229 aaPredicted RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 IL21Q9HBE4 155 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 SPATA6Q9NWH7 488 aaPredicted RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 TNFRSF11BO00300 401 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 MYO1DO94832 1006 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 ETHE1O95571 254 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 OPN1SWP03999 348 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 DBTP11182 482 aaKnown RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 GGT2P36268 569 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 UGT2B10P36537 528 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 CASP9P55211 416 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 TUBA1BP68363 451 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 ADNP2Q6IQ32 1131 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 TUBA1AQ71U36 451 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 THOC6Q86W42 341 aaKnown RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 LYSMD2Q8IV50 215 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 BBS7Q8IWZ6 715 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 TCEAL8Q8IYN2 117 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 KIAA1958Q8N8K9 716 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 ELMO1Q92556 727 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 GGHQ92820 318 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 MAGEB10Q96LZ2 347 aaPredicted RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 DOHHQ9BU89 302 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 MMP27Q9H306 513 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 ZDHHC6Q9H6R6 413 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 ANKHQ9HCJ1 492 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 ANKMY1Q9P2S6 941 aa16.65■□□□□ 0.26
USB1-201ENST00000219281 FAM32AQ9Y421 112 aaKnown RBP16.65■□□□□ 0.26
USB1-201ENST00000219281 C1orf226A1L170 272 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 METTL15A6NJ78 407 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 DPM1O60762 260 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 GCM2O75603 506 aaPredicted RBP16.64■□□□□ 0.25
USB1-201ENST00000219281 UPK1BO75841 260 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 ABCB1P08183 1280 aaPredicted RBP16.64■□□□□ 0.25
USB1-201ENST00000219281 SERPINB1P30740 379 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 CTSKP43235 329 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 SPINT3P49223 89 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 RAE1P78406 368 aaKnown RBP16.64■□□□□ 0.25
USB1-201ENST00000219281 GAB1Q13480 694 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 DDX53Q86TM3 631 aaKnown RBP16.64■□□□□ 0.25
USB1-201ENST00000219281 CCDC103Q8IW40 242 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 FAM217AQ8IXS0 508 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 HS6ST3Q8IZP7 471 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 C1orf52Q8N6N3 182 aaKnown RBP16.64■□□□□ 0.25
USB1-201ENST00000219281 HTRA1Q92743 480 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 MYDGFQ969H8 173 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 SLC35B4Q969S0 331 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 SPG21Q9NZD8 308 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 PADI2Q9Y2J8 665 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 INSL5Q9Y5Q6 135 aa16.64■□□□□ 0.25
USB1-201ENST00000219281 LYVE1Q9Y5Y7 322 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms