RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 VN1R5Q7Z5H4 357 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 ABHD11Q8NFV4 315 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 BHLHE41Q9C0J9 482 aaPredicted RBP28.52■■■□□ 2.16
PABPN1-201ENST00000216727 RHBGQ9H310 441 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 REEP4Q9H6H4 257 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 SZT2Q5T011 3432 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 PRR19A6NJB7 356 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 CXCR2P25025 360 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 SMRP1Q8NCR6 262 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 NETO1Q8TDF5 533 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 ASB12Q8WXK4 309 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 SLC47A1Q96FL8 570 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 VPS50Q96JG6 964 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 ACAT2Q9BWD1 397 aa28.52■■■□□ 2.16
PABPN1-201ENST00000216727 TBC1D3DA0A087WVF3 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3IA0A087WXS9 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3EA0A087X179 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3KA0A087X1G2 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3FA6NER0 549 aaPredicted RBP28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3LB9A6J9 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 UPK1AO00322 258 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 RNASET2O00584 256 aaKnown RBP28.51■■■□□ 2.15
PABPN1-201ENST00000216727 EI24O14681 340 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 CPSF4O95639 269 aaKnown RBP28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3HP0C7X1 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 RPL3P39023 403 aaKnown RBP28.51■■■□□ 2.15
PABPN1-201ENST00000216727 NKG7Q16617 165 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 RNF220Q5VTB9 566 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3GQ6DHY5 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3CQ6IPX1 549 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 TBC1D3Q8IZP1 549 aaPredicted RBP28.51■■■□□ 2.15
PABPN1-201ENST00000216727 PGBD3Q8N328 593 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 RAB42Q8N4Z0 105 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 SNX19Q92543 992 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 INSM2Q96T92 566 aaPredicted RBP28.51■■■□□ 2.15
PABPN1-201ENST00000216727 APOOQ9BUR5 198 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 MYNNQ9NPC7 610 aa28.51■■■□□ 2.15
PABPN1-201ENST00000216727 PRKD3O94806 890 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 SMIM18P0DKX4 95 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 DRD1P21728 446 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 ERICH5Q6P6B1 374 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 R3HCC1LQ7Z5L2 792 aaKnown RBP28.5■■■□□ 2.15
PABPN1-201ENST00000216727 C12orf66Q96MD2 445 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 AIF1LQ9BQI0 150 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 PITHD1Q9GZP4 211 aaPredicted RBP28.5■■■□□ 2.15
PABPN1-201ENST00000216727 AASDHPPTQ9NRN7 309 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 A0A1W2PPV9 198 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 CCNDBP1O95273 360 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 ZNF23P17027 643 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 MERTKQ12866 999 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 PDE7AQ13946 482 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 CPZQ66K79 652 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 USP30Q70CQ3 517 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 EID3Q8N140 333 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 WDR48Q8TAF3 677 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 SCARF2Q96GP6 870 aaPredicted RBP28.5■■■□□ 2.15
PABPN1-201ENST00000216727 ADI1Q9BV57 179 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 OSGEPL1Q9H4B0 414 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 ATAD3AQ9NVI7 634 aa28.5■■■□□ 2.15
PABPN1-201ENST00000216727 KCNK5O95279 499 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 PPIBP23284 216 aaKnown RBP28.49■■■□□ 2.15
PABPN1-201ENST00000216727 MLF2Q15773 248 aaPredicted RBP28.49■■■□□ 2.15
PABPN1-201ENST00000216727 DUS1LQ6P1R4 473 aaKnown RBP28.49■■■□□ 2.15
PABPN1-201ENST00000216727 C16orf78Q8WTQ4 265 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 TRAPPC9Q96Q05 1148 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 FERD3LQ96RJ6 166 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 SPATA9Q9BWV2 254 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 NT5DC2Q9H857 520 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 TPT1P8Q9HAU6 139 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 SH3BP4Q9P0V3 963 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 DNAJB9Q9UBS3 223 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 PIAS3Q9Y6X2 628 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 UNC80Q8N2C7 3258 aa28.49■■■□□ 2.15
PABPN1-201ENST00000216727 C1orf226A1L170 272 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 CACNB4O00305 520 aaPredicted RBP28.48■■■□□ 2.15
PABPN1-201ENST00000216727 SAP18O00422 153 aaKnown RBP28.48■■■□□ 2.15
PABPN1-201ENST00000216727 KLHL18O94889 574 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 SERPINA1P01009 418 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 SERPINB1P30740 379 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 RPS9P46781 194 aaKnown RBP28.48■■■□□ 2.15
PABPN1-201ENST00000216727 CCR8P51685 355 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 OR4K1Q8NGD4 311 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 MTERF3Q96E29 417 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 SIPA1Q96FS4 1042 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 NRTNQ99748 197 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 SMPD3Q9NY59 655 aaPredicted RBP28.48■■■□□ 2.15
PABPN1-201ENST00000216727 SUFUQ9UMX1 484 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 CORO2BQ9UQ03 480 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 FURINP09958 794 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 MRPS21P82921 87 aaKnown RBP28.48■■■□□ 2.15
PABPN1-201ENST00000216727 RBBP5Q15291 538 aaKnown RBP28.48■■■□□ 2.15
PABPN1-201ENST00000216727 VMACQ2NL98 169 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 SLC36A3Q495N2 470 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 FAM71E1Q6IPT2 247 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 IKBIPQ70UQ0 350 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 ZZZ3Q8IYH5 903 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 GOT1L1Q8NHS2 421 aaPredicted RBP28.48■■■□□ 2.15
PABPN1-201ENST00000216727 PNPLA3Q9NST1 481 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 AHSPQ9NZD4 102 aa28.48■■■□□ 2.15
PABPN1-201ENST00000216727 KCNK6Q9Y257 313 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms