RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LOC730098B7Z3J9 87 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 MATN2O00339 956 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 HCN1O60741 890 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 BPGMP07738 259 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 IL9P15248 144 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 CCL11P51671 97 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 OR6N1Q8NGY5 312 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 CENPIQ92674 756 aaPredicted RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 NARS2Q96I59 477 aaKnown RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 CLN6Q9NWW5 311 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PRSS38A1L453 326 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 SLC35F4A4IF30 521 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 ZBTB42B2RXF5 422 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 SMAD9O15198 467 aaKnown RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 GALNT18Q6P9A2 607 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 TEX19Q8NA77 164 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 RBM15BQ8NDT2 890 aaKnown RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 SLC22A8Q8TCC7 542 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 FCRL4Q96PJ5 515 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 GIMAP2Q9UG22 337 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 CYTH4Q9UIA0 394 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 MTHFD1P11586 935 aaKnown RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 IL1RNP18510 177 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 ARSFP54793 590 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 MC1RQ01726 317 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 ATG14Q6ZNE5 492 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PPP1R3BQ86XI6 285 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 CPSF7Q8N684 471 aaKnown RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 LRTOMTQ8WZ04 291 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 LPAR4Q99677 370 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 C9orf16Q9BUW7 83 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 MCUBQ9NWR8 336 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PTGFRNQ9P2B2 879 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 CD47Q08722 323 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 RBBP4Q09028 425 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 RBM20Q5T481 1227 aaKnown RBP13.29□□□□□ -0.28
SIX4-201ENST00000216513 ZCCHC12Q6PEW1 402 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 ZNF100Q8IYN0 542 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 AGBL5Q8NDL9 886 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 MKKSQ9NPJ1 570 aaPredicted RBP13.29□□□□□ -0.28
SIX4-201ENST00000216513 G3V2T6 193 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 TLR4O00206 839 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 PRPS2P11908 318 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 ST13P50502 369 aaKnown RBP13.29□□□□□ -0.28
SIX4-201ENST00000216513 SLC9B1Q4ZJI4 515 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 ACSBG2Q5FVE4 666 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 RNF220Q5VTB9 566 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 SLC6A14Q9UN76 642 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 SNPHO15079 494 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 OR5F1O95221 314 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 TNFAIP8O95379 198 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 FCHO2Q0JRZ9 810 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 HYAL1Q12794 435 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 ANKRD26P1Q6NSI1 321 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 MREGQ8N565 214 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 STC1P52823 247 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 REP15Q6BDI9 236 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 CTRCQ99895 268 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 PLLPQ9Y342 182 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 MYH3P11055 1940 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 RNH1P13489 461 aaKnown RBP13.29□□□□□ -0.28
SIX4-201ENST00000216513 HLA-FP30511 346 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 CRISP3P54108 245 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 SPIN4Q56A73 249 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 NKAIN2Q5VXU1 208 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 WDR77Q9BQA1 342 aaPredicted RBP13.29□□□□□ -0.28
SIX4-201ENST00000216513 PCDHAC1Q9H158 963 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 ACTL8Q9H568 366 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
SIX4-201ENST00000216513 COL22A1Q8NFW1 1626 aaPredicted RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 ARHGEF33A8MVX0 844 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 EDN1P05305 212 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 CHN2P52757 468 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 MAZP56270 477 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 RHAGQ02094 409 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 HERC3Q15034 1050 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 TCTE1Q5JU00 501 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 AADATQ8N5Z0 425 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 TSPAN14Q8NG11 270 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 OR4K14Q8NGD5 310 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 DHRS12A0PJE2 317 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 NPIPA5E9PKD4 350 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 WWP2O00308 870 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 PLOD3O60568 738 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 MAFKO60675 156 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 RBMXL2O75526 392 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 CBLP22681 906 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 GNALP38405 381 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 RPS3AP61247 264 aaKnown RBP13.28□□□□□ -0.28
SIX4-201ENST00000216513 SP140Q13342 867 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 RASGEF1CQ8N431 466 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 FITM2Q8N6M3 262 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 PQLC3Q8N755 202 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 OR14L1PQ8NHC6 308 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 ENKURQ8TC29 256 aa13.28□□□□□ -0.28
SIX4-201ENST00000216513 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms