RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 LEFTY1O75610 366 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ZNF24P17028 368 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 SNRPD1P62314 119 aaKnown RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 RBM48Q5RL73 367 aaKnown RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 NIPSNAP1Q9BPW8 284 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 KCNH6Q9H252 994 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 DCSTAMPQ9H295 470 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ARHGEF33A8MVX0 844 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 TNFRSF11BO00300 401 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 LRRTM2O43300 516 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 LRG1P02750 347 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 ATP1B2P14415 290 aaPredicted RBP14.55□□□□□ -0.08
EFNB1-201ENST00000204961 AMD1P17707 334 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 AP1S1P61966 158 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 CAMK2GQ13555 558 aaPredicted RBP14.55□□□□□ -0.08
EFNB1-201ENST00000204961 INAVAQ3KP66 663 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 ALG1LQ6GMV1 187 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 FKBP10Q96AY3 582 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 OTULINQ96BN8 352 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 ARSGQ96EG1 525 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 HTATIP2Q9BUP3 242 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 MUC13Q9H3R2 512 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 FAM83DQ9H4H8 585 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 TPRKBQ9Y3C4 175 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 GLOD5A6NK44 160 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 TMEM189-UBE2V1I3L0A0 370 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 TFECO14948 347 aaPredicted RBP14.55□□□□□ -0.08
EFNB1-201ENST00000204961 AIREO43918 545 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 ERN1O75460 977 aaKnown RBP14.55□□□□□ -0.08
EFNB1-201ENST00000204961 KLK1P06870 262 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 C1SP09871 688 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 SERPINB10P48595 397 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 GRIK2Q13002 908 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 TAB1Q15750 504 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 AGTRAPQ6RW13 159 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 TAGAPQ8N103 731 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 CADM3Q8N126 398 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 DCAF4L2Q8NA75 395 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 CHPT1Q8WUD6 406 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 C1QTNF3Q9BXJ4 246 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 HMG20AQ9NP66 347 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 ATAD3AQ9NVI7 634 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 ENPP5Q9UJA9 477 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 DUSP12Q9UNI6 340 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 PMF1-BGLAPU3KQ54 211 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 REV3LO60673 3130 aa14.55□□□□□ -0.08
EFNB1-201ENST00000204961 UNCXA6NJT0 531 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 H3BM21 787 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 PSMD11O00231 422 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 PCDH17O14917 1159 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 NDUFB5O43674 189 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 ZNF821O75541 412 aaPredicted RBP14.54□□□□□ -0.08
EFNB1-201ENST00000204961 CPNE6O95741 557 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 CYP2A7P20853 494 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 CD6P30203 668 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 C2orf80Q0P641 193 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 NPRL3Q12980 569 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 TPRG1Q6ZUI0 275 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 RNF130Q86XS8 419 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 HUS1BQ8NHY5 278 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 WDR48Q8TAF3 677 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 CAPSLQ8WWF8 208 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 NDEL1Q9GZM8 345 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 ABCG4Q9H172 646 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 SCN5AQ14524 2016 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 K7ESM1 405 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 WWP2O00308 870 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 SSX4O60224 188 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 GRK5P34947 590 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 WASP42768 502 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 CTSKP43235 329 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 TLE2Q04725 743 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 UBE3AQ05086 875 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 ABHD18Q0P651 414 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 INO80DQ53TQ3 878 aaPredicted RBP14.54□□□□□ -0.08
EFNB1-201ENST00000204961 SLC8B1Q6J4K2 584 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 LEMD2Q8NC56 503 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 NEIL2Q969S2 332 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 ALG14Q96F25 216 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 ALPK1Q96QP1 1244 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 SLC46A2Q9BY10 475 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 ZNF639Q9UID6 485 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 H3BN98 237 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 GFRA2O00451 464 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 KPNA4O00629 521 aaPredicted RBP14.54□□□□□ -0.08
EFNB1-201ENST00000204961 MYO1DO94832 1006 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 PAX3P23760 479 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 NR4A2P43354 598 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 MTA1Q13330 715 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 DUOXA1Q1HG43 343 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.54□□□□□ -0.08
EFNB1-201ENST00000204961 C22orf39Q6P5X5 142 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 SPRED2Q7Z698 418 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 CCDC103Q8IW40 242 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 KLK6Q92876 244 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 MUL1Q969V5 352 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 APOL4Q9BPW4 351 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 PRR14Q9BWN1 585 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 RNF208Q9H0X6 261 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 OR2AG1Q9H205 316 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms