RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FKBP9O95302 570 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 MPC1LP0DKB6 136 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 BMP4P12644 408 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 DGKGP49619 791 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ZNF805Q5CZA5 627 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 FKBP9P1Q75LS8 142 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 B3GNT8Q7Z7M8 397 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 TCAIMQ8N3R3 496 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 HTRA1Q92743 480 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 NEIL2Q969S2 332 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 TPD52L3Q96J77 140 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 RMI1Q9H9A7 625 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 AASDHPPTQ9NRN7 309 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.67□□□□□ -0.38
CTNS-201ENST00000046640 MAFFQ9ULX9 164 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 OTOL1A6NHN0 477 aaPredicted RBP12.67□□□□□ -0.38
CTNS-201ENST00000046640 SLCO2B1O94956 709 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 MT-ND2P03891 347 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ZNF30P17039 623 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 SEPHS1P49903 392 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 GZMMP51124 257 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 SLC13A2Q13183 592 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ZDHHC20Q5W0Z9 365 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 Q6ZPB1 254 aaPredicted RBP12.67□□□□□ -0.38
CTNS-201ENST00000046640 GPR149Q86SP6 731 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ACAT2Q9BWD1 397 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 ABCB10Q9NRK6 738 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 MRPS23Q9Y3D9 190 aaKnown RBP12.67□□□□□ -0.38
CTNS-201ENST00000046640 INSL6Q9Y581 213 aa12.67□□□□□ -0.38
CTNS-201ENST00000046640 HTR3EA5X5Y0 456 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 EVPLLA8MZ36 301 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 PRRT4C9JH25 899 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 MMP20O60882 483 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 FAM20BO75063 409 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 ATG13O75143 517 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 FGBP02675 491 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 LCKP06239 509 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 IMPA1P29218 277 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 AP1S2P56377 157 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 INAVAQ3KP66 663 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 ATG9BQ674R7 924 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 TMC5Q6UXY8 1006 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 AHSA2Q719I0 299 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 SLC22A16Q86VW1 577 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 AADATQ8N5Z0 425 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 TRAM1L1Q8N609 369 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 VN1R2Q8NFZ6 395 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 OR4K1Q8NGD4 311 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 BADQ92934 168 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 RSPRY1Q96DX4 576 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 PYURFQ96I23 114 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 CNDP2Q96KP4 475 aaKnown RBP12.66□□□□□ -0.38
CTNS-201ENST00000046640 ZSCAN5AQ9BUG6 496 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 ITM2CQ9NQX7 267 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 GULP1Q9UBP9 304 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 PLAGL1Q9UM63 463 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 GMPPBQ9Y5P6 360 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 AGRPO00253 132 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 JRKO75564 520 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 ARHGEF15O94989 841 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 HPRP00739 348 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 ANXA4P09525 319 aaPredicted RBP12.66□□□□□ -0.38
CTNS-201ENST00000046640 CCDC92Q53HC0 331 aaPredicted RBP12.66□□□□□ -0.38
CTNS-201ENST00000046640 LRIF1Q5T3J3 769 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 TMEM53Q6P2H8 277 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
CTNS-201ENST00000046640 ANKRD13BQ86YJ7 626 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 SVOPLQ8N434 492 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 HUS1BQ8NHY5 278 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
CTNS-201ENST00000046640 CERS4Q9HA82 394 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 ATAD3AQ9NVI7 634 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 ASIC5Q9NY37 505 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 PDP1Q9P0J1 537 aaPredicted RBP12.66□□□□□ -0.38
CTNS-201ENST00000046640 ZNF451Q9Y4E5 1061 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
CTNS-201ENST00000046640 GABRR3A8MPY1 467 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 H3BM21 787 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 TGFB1P01137 390 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CYP17A1P05093 508 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 GSTM1P09488 218 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 MAPK1P28482 360 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 MASP1P48740 699 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CLK3P49761 638 aaKnown RBP12.65□□□□□ -0.38
CTNS-201ENST00000046640 DAPP51397 102 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 WNT3P56703 355 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 RPS13P62277 151 aaKnown RBP12.65□□□□□ -0.38
CTNS-201ENST00000046640 OXA1LQ15070 435 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 SMU1Q2TAY7 513 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 GGTA1PQ4G0N0 100 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 C1orf53Q5VUE5 145 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 RAET1GQ6H3X3 334 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 METTL2BQ6P1Q9 378 aaKnown RBP12.65□□□□□ -0.38
CTNS-201ENST00000046640 TECPR1Q7Z6L1 1165 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CALHM3Q86XJ0 350 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 ATG16L2Q8NAA4 619 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 WDR20Q8TBZ3 569 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 SPPL3Q8TCT6 385 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 NELL1Q92832 810 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 IL17FQ96PD4 163 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms