RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Zcchc3Q8BPK2 400 aaKnown RBP10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Peli3Q8BXR6 445 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nt5dc1Q8C5P5 467 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Colec10Q8CF98 277 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pex6Q99LC9 981 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cdrt4Q9DA64 179 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ddi2A2ADY9 399 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn2r24D3YUI0 854 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gabra3P26049 492 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cdkn2bP55271 130 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Usp30Q3UN04 517 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pcbp2Q61990 362 aaKnown RBP10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1051Q7TR76 308 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 BspryQ80YW5 473 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fam92aQ8BP22 355 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gpr22Q8BZL4 432 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zmiz2Q8CIE2 920 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ablim1Q8K4G5 861 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 St8sia6Q8K4T1 398 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr357Q8VFP4 308 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc3a1Q91WV7 685 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 EtfaQ99LC5 333 aaKnown RBP10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dph2Q9CR25 489 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fndc8Q9D2H8 321 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Med27Q9DB40 311 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rab13Q9DD03 202 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Abcb10Q9JI39 715 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Asb1Q9WV74 336 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm43951A0A0N4SUT6 962 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ect2lA0A140LIP2 953 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Skint7A7XV04 395 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Usp51B1AY15 661 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Phf11bB4XVQ1 276 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Kctd17E0CYQ0 296 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Smim22J3QP37 91 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gtpbp1O08582 668 aaKnown RBP10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dmp1O55188 503 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fgf18O89101 207 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zfp28P10078 825 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 FesP16879 822 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 WarsP32921 481 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dsc1P55849 886 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 PgrQ00175 926 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tex10Q3URQ0 928 aaKnown RBP10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Kif18bQ6PFD6 834 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Aoc2Q812C9 757 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cyp20a1Q8BKE6 462 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 H2-Q4Q8HWB2 354 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dlk2Q8K1E3 382 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ubqln1Q8R317 582 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cd207Q8VBX4 331 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rbms2Q8VC70 383 aaKnown RBP10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 FggQ8VCM7 436 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Uck2Q99PM9 261 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Lat2Q9JHL0 203 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rgs1Q9JL25 209 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc22a4Q9Z306 553 aa10□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1188A2AV10 312 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rex2A2AWF2 685 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Amd2D3Z6H8 334 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Angpt1O08538 498 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Amd1P0DMN7 334 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Btbd1P58544 488 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sox4Q06831 440 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Kcna7Q17ST2 489 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cd163Q2VLH6 1121 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pyroxd2Q3U4I7 581 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fam189a2Q4FZH1 290 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mppe1Q80XL7 396 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Yipf4Q8C407 246 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Adnp2Q8CHC8 1165 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1208Q8VG47 308 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr525Q8VGL5 309 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pcdha8Q91Y12 946 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc39a5Q9D856 535 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn1r65Q9EPS7 332 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 AcrP23578 436 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc16a3P57787 470 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Glycam1Q02596 151 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 B3gnt3Q5JCS9 372 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 OclnQ61146 521 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mapk10Q61831 464 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Kiss1Q6Y4S4 130 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ldoc1Q7TPY9 151 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Proser3Q7TSA6 634 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 MmaaQ8C7H1 415 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mospd1Q8VEL0 213 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pcdhac2Q91Y09 1006 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Camk2gQ923T9 529 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gabra4Q9D6F4 552 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Idh3aQ9D6R2 366 aaKnown RBP9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 AcoxlQ9DBS4 632 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Scn3aA2ASI5 1947 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm5565A0A0G2JGB2 317 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr671A0A1B0GSN5 317 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zfp946F6VWU8 523 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Srp54P14576 504 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 PvalbP32848 110 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rin3P59729 980 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rps13P62301 151 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms