RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Cbr4Q91VT4 236 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Cts7Q91ZF2 331 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ceacam2Q925P2 520 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Lsm7Q9CQQ8 103 aaKnown RBP12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 CacybpQ9CXW3 229 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Q9CZV2 255 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Atp5dQ9D3D9 168 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Phc2Q9QWH1 850 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Srd5a3Q9WUP4 330 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Olfr1303A2AVW1 312 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gm3752A6NAT4 150 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 PahP16331 453 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 AcrP23578 436 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Hnf4aP49698 474 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Nfatc3P97305 1075 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 StimateQ3UF25 288 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Tmed1Q3V009 227 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ccdc185Q3V118 621 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Olfr1364Q5SZS9 314 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Med26Q7TN02 588 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Hamp2Q80T19 83 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Nrde2Q80XC6 1172 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 PgghgQ8BP56 690 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Sumf2Q8BPG6 308 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 TtpaQ8BWP5 278 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Lrrc3bQ8VCH9 259 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 HnrnpllQ921F4 591 aaKnown RBP12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Camk2gQ923T9 529 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 AassQ99K67 926 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 NpvfQ9ESQ8 188 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Slc25a13Q9QXX4 676 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Vnn3Q9QZ25 500 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ppm1dQ9QZ67 598 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gm13119B1ARV5 481 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Slc25a54B1AUS6 473 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 TagapB2RWW0 714 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Zfp563B8JJZ9 448 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 VldlrP98156 873 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Pik3c3Q6PF93 887 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Znf503Q7TMA2 652 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Pcdh8Q7TSK3 1070 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Gpr139Q80UC8 345 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 UnkQ8BL48 810 aaKnown RBP12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Ccdc17Q8CE13 565 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Tbc1d14Q8CGA2 694 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Prmt5Q8CIG8 637 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Q8K039 155 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 SuoxQ8R086 546 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Rbm12Q8R4X3 992 aaKnown RBP12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Impa2Q91UZ5 290 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Cyp2j9Q924D1 502 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Kdelr2Q9CQM2 212 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Serpinb11Q9CQV3 388 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Scamp4Q9JKV5 230 aa12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 FarsbQ9WUA2 589 aaKnown RBP12.28□□□□□ -0.44
Rnf4-201ENSMUST00000030992 Nxpe3B9EKK6 559 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Ap1arE9PYF7 298 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Foxq1O70220 400 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 TecP24604 630 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Sel1l2Q3V172 688 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Spire1Q52KF3 598 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Prkd1Q62101 918 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Tyw1Q8BJM7 721 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Efemp1Q8BPB5 493 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Fam110bQ8C739 366 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Angptl7Q8R1Q3 337 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Utp6Q8VCY6 597 aaKnown RBP12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Mlc1Q8VHK5 382 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Ifitm3Q9CQW9 137 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Necab3Q9D6J4 353 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 RtcAQ9D7H3 366 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Q9DAD0 168 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Tgm1Q9JLF6 815 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 PrepQ9QUR6 710 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Rdh11Q9QYF1 316 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Gm35911A0A1D5RLS7 214 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Trmt1lA2RSY6 728 aaKnown RBP12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 RhoP15409 348 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 RxrgP28705 463 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 CntfP51642 198 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Rin3P59729 980 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Serpina7P61939 418 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Apoa1Q00623 264 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Dennd1bQ3U1T9 766 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 DgkbQ6NS52 802 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Olfr845Q7TRG2 312 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Slc16a12Q8BGC3 486 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Cpne3Q8BT60 533 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 DutQ8VCG1 200 aaKnown RBP12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Slc5a2Q923I7 670 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Mto1Q923Z3 669 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Eif3mQ99JX4 374 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 NgrnQ99KS2 293 aaKnown RBP12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Clec2gQ9D676 269 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 AcoxlQ9DBS4 632 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Olfr706Q9EPF8 316 aa12.27□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Nlrp1bA1Z198 1177 aa12.26□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Fbrsl1E9Q9T0 1031 aa12.26□□□□□ -0.45
Rnf4-201ENSMUST00000030992 H2-Q1O19441 368 aa12.26□□□□□ -0.45
Rnf4-201ENSMUST00000030992 Clk3O35492 638 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms