RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 C9P02748 559 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 C8GP07360 202 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 OR56A5P0C7T3 313 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 ACPPP15309 386 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 RRM2P31350 389 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 GRK5P34947 590 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 PLEKHG6Q3KR16 790 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 PLD3Q8IV08 490 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 OR8J2Q8NGG1 315 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 TRMT2BQ96GJ1 504 aaKnown RBP13.36□□□□□ -0.27
PHGDH-233ENST00000642021 ABHD8Q96I13 439 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 HRASLS5Q96KN8 279 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 DCSTAMPQ9H295 470 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 CCNB1IP1Q9NPC3 277 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 RLIMQ9NVW2 624 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 VPS29Q9UBQ0 182 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 PCDHB11Q9Y5F2 797 aa13.36□□□□□ -0.27
PHGDH-233ENST00000642021 CLDN24A6NM45 220 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 CNOT3O75175 753 aaKnown RBP13.35□□□□□ -0.27
PHGDH-233ENST00000642021 CD40LGP29965 261 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 GRK3P35626 688 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 CSNK1DP48730 415 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 TMED10P49755 219 aaKnown RBP13.35□□□□□ -0.27
PHGDH-233ENST00000642021 HNMTP50135 292 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 HNRNPFP52597 415 aaKnown RBP13.35□□□□□ -0.27
PHGDH-233ENST00000642021 IRF8Q02556 426 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 FADDQ13158 208 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 UBE2UQ5VVX9 321 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 ERICH5Q6P6B1 374 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 TTC23LQ6PF05 361 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 BBS7Q8IWZ6 715 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 MCFD2Q8NI22 146 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 WDR20Q8TBZ3 569 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 COPS4Q9BT78 406 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 CHST8Q9H2A9 424 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 RNF167Q9H6Y7 350 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 ABCB8Q9NUT2 735 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 TMEM202A6NGA9 273 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 E7EQ34 232 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 OPN1SWP03999 348 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 C1SP09871 688 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 SRCP12931 536 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 PPP3CCP48454 512 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 PPP5CP53041 499 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 GAB1Q13480 694 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 ZNF648Q5T619 568 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-233ENST00000642021 NAGSQ8N159 534 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 TCAIMQ8N3R3 496 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 SCAMP4Q969E2 229 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 SLC38A4Q969I6 547 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 C11orf24Q96F05 449 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-233ENST00000642021 FEVQ99581 238 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 DUSP26Q9BV47 211 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 ITPAQ9BY32 194 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 KLHL42Q9P2K6 505 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
PHGDH-233ENST00000642021 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
PHGDH-233ENST00000642021 NRG2O14511 850 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 PCDH7O60245 1069 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 GADD45AP24522 165 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 EIF2DP41214 584 aaKnown RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 NUDT6P53370 316 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 CRISP3P54108 245 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 RAE1P78406 368 aaKnown RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 ABRQ12979 859 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 VEZF1Q14119 521 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 CCSMST1Q4G0I0 132 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 XKR6Q5GH73 641 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 CPA6Q8N4T0 437 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 OR52J3Q8NH60 311 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 IPCEF1Q8WWN9 437 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 AUTS2Q8WXX7 1259 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 MRPL9Q9BYD2 267 aaKnown RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 SUV39H2Q9H5I1 410 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 RUBCNLQ9H714 662 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 ABCB10Q9NRK6 738 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 C1orf226A1L170 272 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 AIREO43918 545 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 RFPL2O75678 378 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 ALOX5P09917 674 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 ATP1B2P14415 290 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 MAPK8P45983 427 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 CLK1P49759 484 aaKnown RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 DOC2AQ14183 400 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 CARTPTQ16568 116 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 MINDY2Q8NBR6 621 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 GGHQ92820 318 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 ECHDC3Q96DC8 303 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 SCLYQ96I15 445 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 GPATCH2Q9NW75 528 aa13.34□□□□□ -0.27
PHGDH-233ENST00000642021 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 FAM120CQ9NX05 1096 aaKnown RBP13.34□□□□□ -0.27
PHGDH-233ENST00000642021 SLC6A14Q9UN76 642 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms