RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 DHCR24Q15392 516 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 OR4E2Q8NGC2 313 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 PRAP1Q96NZ9 151 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 KCNC2Q96PR1 638 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 MAFFQ9ULX9 164 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 H3BSA7 217 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 C9P02748 559 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 SRCP12931 536 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 RAPSNQ13702 412 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 C10orf62Q5T681 223 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-223ENST00000640640 KHDRBS2Q5VWX1 349 aaKnown RBP17.02■□□□□ 0.32
SCARB2-223ENST00000640640 FAM131AQ6UXB0 335 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 LINC01465Q8N7H1 131 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 KCT2Q8NC54 265 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 IL4I1Q96RQ9 567 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 IL26Q9NPH9 171 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 TREX1Q9NSU2 369 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 EMCNQ9ULC0 261 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 STRCP1A6NGW2 1772 aa17.02■□□□□ 0.32
SCARB2-223ENST00000640640 HTR1EP28566 365 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 SLC6A4P31645 630 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 EIF4HQ15056 248 aaKnown RBP17.02■□□□□ 0.31
SCARB2-223ENST00000640640 SYT16Q17RD7 645 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 SMARCD3Q6STE5 483 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 PIANPQ8IYJ0 282 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 FAM46DQ8NEK8 389 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 KHSRPQ92945 711 aaKnown RBP eCLIP17.02■□□□□ 0.31
SCARB2-223ENST00000640640 ABCG4Q9H172 646 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 ANKHQ9HCJ1 492 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 PHF24Q9UPV7 400 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 PCDHB11Q9Y5F2 797 aa17.02■□□□□ 0.31
SCARB2-223ENST00000640640 MAP1BP46821 2468 aaKnown RBP17.02■□□□□ 0.31
SCARB2-223ENST00000640640 H1F0P07305 194 aaKnown RBP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 FESP07332 822 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 CHRM5P08912 532 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 UBXN2BQ14CS0 331 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 QPRTQ15274 297 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 CASD1Q96PB1 797 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 RACGAP1Q9H0H5 632 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 KCNK13Q9HB14 408 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 PTBP2Q9UKA9 531 aaKnown RBP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 TOR1BO14657 336 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 HCN1O60741 890 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 C8BP07358 591 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 STAT5AP42229 794 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 CCT3P49368 545 aaKnown RBP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 HTR6P50406 440 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 SLC8B1Q6J4K2 584 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 CRTC1Q6UUV9 634 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 ZNF534Q76KX8 674 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 PRSS58Q8IYP2 241 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 GPR150Q8NGU9 434 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 FAR1Q8WVX9 515 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 REEP4Q9H6H4 257 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 SMURF2Q9HAU4 748 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 POFUT2Q9Y2G5 429 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 A0A0U1RQS6 177 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 SMAD6O43541 496 aaKnown RBP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 C1GALT1C1LP0DN25 315 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 LAPTM4AQ15012 233 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 EGFLAMQ63HQ2 1017 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 ATG9BQ674R7 924 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 TAS1R1Q7RTX1 841 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 CAMKVQ8NCB2 501 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 MOSPD2Q8NHP6 518 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 RAB7BQ96AH8 199 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 GAL3ST4Q96RP7 486 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 GSTO2Q9H4Y5 243 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 IKZF2Q9UKS7 526 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 TFECO14948 347 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 DOC2AQ14183 400 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 HACD2Q6Y1H2 254 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 SLC39A11Q8N1S5 342 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 SCAIQ8N9R8 606 aa17.01■□□□□ 0.31
SCARB2-223ENST00000640640 POLR2J2Q9GZM3 115 aaKnown RBP17.01■□□□□ 0.31
SCARB2-223ENST00000640640 EEDO75530 441 aaKnown RBP17■□□□□ 0.31
SCARB2-223ENST00000640640 ALOX5P09917 674 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 CD36P16671 472 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 MXD1Q05195 221 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 CHST14Q8NCH0 376 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 S100A13Q99584 98 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 TOR3AQ9H497 397 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 HCSTQ9UBK5 93 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 ACSL5Q9ULC5 683 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 OAS3Q9Y6K5 1087 aaKnown RBP17■□□□□ 0.31
SCARB2-223ENST00000640640 EVPLQ92817 2033 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 AXIN1O15169 862 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 TFPIP10646 304 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 JUPP14923 745 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 VEGFBP49765 207 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 ERVPABLB-1P60509 514 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 BTN3A2P78410 334 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 MYBPC3Q14896 1274 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 CYBRD1Q53TN4 286 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 OR4C6Q8NH72 309 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 ARRDC2Q8TBH0 407 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 CD200R1Q8TD46 325 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 HTRA1Q92743 480 aa17■□□□□ 0.31
SCARB2-223ENST00000640640 MRPL39Q9NYK5 338 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms