RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CACHD1Q5VU97 1274 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 TMEM71Q6P5X7 295 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 SLCO4C1Q6ZQN7 724 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 GPRIN3Q6ZVF9 776 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 TMPRSS9Q7Z410 1059 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 MILR1Q7Z6M3 343 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 OR6Y1Q8NGX8 325 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 DNAJC9Q8WXX5 260 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 MCUR1Q96AQ8 359 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 CD180Q99467 661 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 DPYSL5Q9BPU6 564 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 TRMOQ9BU70 441 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 DRC3Q9H069 523 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 SEMA6CQ9H3T2 930 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 ZNF395Q9H8N7 513 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-208ENST00000634934 EML4Q9HC35 981 aaKnown RBP13.87□□□□□ -0.19
LINC00339-208ENST00000634934 SNX7Q9UNH6 387 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 MN1Q10571 1320 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-208ENST00000634934 ASPMQ8IZT6 3477 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 IGKV1-8A0A0C4DH67 115 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 A0A1B0GTL3 188 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 SLC9B1P1A6NJY1 282 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 D6RAR5 112 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 NTN3O00634 580 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-208ENST00000634934 UBFD1O14562 309 aaKnown RBP13.86□□□□□ -0.19
LINC00339-208ENST00000634934 ITM2AO43736 263 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 PRAMEF4O60810 478 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 FKBP9O95302 570 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 C9P02748 559 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 C1GALT1C1LP0DN25 315 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 ST6GAL1P15907 406 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 ARRB2P32121 409 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 HK2P52789 917 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 E2F1Q01094 437 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 MEF2AQ02078 507 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-208ENST00000634934 TRAF3Q13114 568 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 DOC2AQ14183 400 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 CLPPQ16740 277 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-208ENST00000634934 GSTA3Q16772 222 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 PRAMEF9Q5VWM5 478 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 ATG9BQ674R7 924 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 AAGABQ6PD74 315 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 FIGLAQ6QHK4 219 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 GLRX5Q86SX6 157 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 SYVN1Q86TM6 617 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 LSMEM2Q8N112 164 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 ABHD11Q8NFV4 315 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 OR4F6Q8NGB9 312 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 OR4D9Q8NGE8 314 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 WDR48Q8TAF3 677 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 TRAPPC9Q96Q05 1148 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 ZNF382Q96SR6 550 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 CCDC106Q9BWC9 280 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 PELI2Q9HAT8 420 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 PRM3Q9NNZ6 103 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 C1GALT1Q9NS00 363 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 TMEM184CQ9NVA4 438 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 TOR4AQ9NXH8 423 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 RNF11Q9Y3C5 154 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 PCDHGA1Q9Y5H4 931 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 UNC13CQ8NB66 2214 aa13.86□□□□□ -0.19
LINC00339-208ENST00000634934 IGHV5-51A0A0C4DH38 117 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 NVLO15381 856 aaKnown RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PRAMEF10O60809 474 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CRCPO75575 148 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 OR4F21O95013 312 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PSMG1O95456 288 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CLDN9O95484 217 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 EBLN1P0CF75 366 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 HRH2P25021 359 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PRDX6P30041 224 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ARL4DP49703 201 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 SEPHS1P49903 392 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PKNOX1P55347 436 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ERVPABLB-1P60509 514 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 SH3BP2P78314 561 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 SLBPQ14493 270 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PHF19Q5T6S3 580 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ZNF574Q6ZN55 896 aaPredicted RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CUZD1Q86UP6 607 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 WDR75Q8IWA0 830 aaKnown RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ZUFSPQ96AP4 578 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 NTMT1Q9BV86 223 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 NMUR2Q9GZQ4 415 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 SOHLH2Q9NX45 425 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ANGPTL2Q9UKU9 493 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 FEZF1A0PJY2 475 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 AGRPO00253 132 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 MAP3K7O43318 606 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 NRP2O60462 931 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 FKBP6O75344 327 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ENTPD5O75356 428 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ZBTB11O95625 1053 aaPredicted RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ESRRBO95718 433 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CD22P20273 847 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 GRK3P35626 688 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CSNK1G2P78368 415 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 BTKQ06187 659 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms