RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TCEA2Q15560 299 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 CYP2A13Q16696 494 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 DNAL1Q4LDG9 190 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 CCDC157Q569K6 752 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 CATSPEREQ5SY80 951 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 THEMIS2Q5TEJ8 643 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 IQCHQ86VS3 1027 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 MIER2Q8N344 545 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 C2orf73Q8N5S3 287 aaPredicted RBP9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 FAM174AQ8TBP5 190 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 SELENOMQ8WWX9 145 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 MTFMTQ96DP5 389 aaKnown RBP9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 WDR34Q96EX3 536 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 PPP3R2Q96LZ3 170 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 C1orf50Q9BV19 199 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 SPNS1Q9H2V7 528 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC40A1Q9NP59 571 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 AASDHPPTQ9NRN7 309 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 CCDC167Q9P0B6 97 aa9.15□□□□□ -0.95
PDLIM5-223ENST00000627587 A0A1W2PR77 199 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 FAM149AA5PLN7 773 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 C9JVG2 144 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 TLR4O00206 839 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 KDM1AO60341 852 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 RSL1D1O76021 490 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 RASGRP1O95267 797 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 WNT1P04628 370 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 IL12AP29459 219 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 ACADVLP49748 655 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 ELF3P78545 371 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 E2F1Q01094 437 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 ZNF33BQ06732 778 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 MAD2L1Q13257 205 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 CUL3Q13618 768 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 FZD2Q14332 565 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 RPE65Q16518 533 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 AP5B1Q2VPB7 878 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 AGKQ53H12 422 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 SGO1Q5FBB7 561 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 FRG2Q64ET8 278 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 GRHL2Q6ISB3 625 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 ABRAXAS1Q6UWZ7 409 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 LAYNQ6UX15 382 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 TMPRSS11BQ86T26 416 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 HID1Q8IV36 788 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 ARHGAP24Q8N264 748 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 MFSD2AQ8NA29 543 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 NUDT8Q8WV74 236 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 MCUR1Q96AQ8 359 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 RCN3Q96D15 328 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC6A18Q96N87 628 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 FRG2BQ96QU4 278 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 HAUS8Q9BT25 410 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 RAB11FIP5Q9BXF6 653 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 MVB12BQ9H7P6 319 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 TRNAU1APQ9NX07 287 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 PCDHGA11Q9Y5H2 935 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 HEBP2Q9Y5Z4 205 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 AK5Q9Y6K8 562 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 DGKBQ9Y6T7 804 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 IGSF10Q6WRI0 2623 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 GOLGA4Q13439 2230 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 APC2O95996 2303 aa9.14□□□□□ -0.95
PDLIM5-223ENST00000627587 A0A088AWK7 358 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 SPTY2D1-AS1A0A0U1RR47 76 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 ASPDHA6ND91 283 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 NPIPB8E9PQR5 432 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 H0YIV9 168 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 TNFP01375 233 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 CELA2BP08218 269 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 THEGLP0DJG4 465 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 CKMT2P17540 419 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 CAPN3P20807 821 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 PRPH2P23942 346 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 PSMB5P28074 263 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 EIF2S3P41091 472 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 ACTR1BP42025 376 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 NME5P56597 212 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 NXPH1P58417 271 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 ACTR1AP61163 376 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 UFM1P61960 85 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 EMX2Q04743 252 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 ILF3Q12906 894 aaKnown RBP eCLIP9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 SMU1Q2TAY7 513 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 PRAMEF14Q5SWL7 426 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 PRAMEF13Q5VWM6 474 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 LCTLQ6UWM7 567 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 WASH2PQ6VEQ5 465 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 RETREG3Q86VR2 466 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 SFTPA2Q8IWL1 248 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 EID2Q8N6I1 236 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 FAM13CQ8NE31 585 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 PROKR1Q8TCW9 393 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC5A11Q8WWX8 675 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 SH3KBP1Q96B97 665 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 C11orf24Q96F05 449 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 CLPTM1LQ96KA5 538 aa9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 BBC3Q96PG8 261 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-223ENST00000627587 TWSG1Q9GZX9 223 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms