RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 DRC3Q9H069 523 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 SLC39A10Q9ULF5 831 aa13.02□□□□□ -0.33
SNX1-214ENST00000625244 KLF13Q9Y2Y9 288 aaPredicted RBP13.02□□□□□ -0.33
SNX1-214ENST00000625244 CHD3Q12873 2000 aaKnown RBP13.01□□□□□ -0.33
SNX1-214ENST00000625244 KRT87PA6NCN2 255 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 ZNF487B1APH4 448 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 KLRC4-KLRK1H3BQV0 150 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 TACR1P25103 407 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 TAS2R50P59544 299 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 GPR85P60893 370 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 PLOD1Q02809 727 aaPredicted RBP13.01□□□□□ -0.33
SNX1-214ENST00000625244 SFT2D3Q587I9 215 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 GARNL3Q5VVW2 1013 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 RFX6Q8HWS3 928 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 SLC22A15Q8IZD6 547 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 OR2A1Q8NGT9 310 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 BDH2Q9BUT1 245 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 ATG10Q9H0Y0 220 aa13.01□□□□□ -0.33
SNX1-214ENST00000625244 A0A1W2PPR1 153 aa13□□□□□ -0.33
SNX1-214ENST00000625244 ARHGEF33A8MVX0 844 aa13□□□□□ -0.33
SNX1-214ENST00000625244 CDK2AP1O14519 115 aa13□□□□□ -0.33
SNX1-214ENST00000625244 AKR1B10O60218 316 aa13□□□□□ -0.33
SNX1-214ENST00000625244 F12P00748 615 aaPredicted RBP13□□□□□ -0.33
SNX1-214ENST00000625244 CYC1P08574 325 aa13□□□□□ -0.33
SNX1-214ENST00000625244 ZFXP17010 805 aaPredicted RBP13□□□□□ -0.33
SNX1-214ENST00000625244 TRHRP34981 398 aaPredicted RBP13□□□□□ -0.33
SNX1-214ENST00000625244 ADRA1AP35348 466 aa13□□□□□ -0.33
SNX1-214ENST00000625244 HLCSP50747 726 aa13□□□□□ -0.33
SNX1-214ENST00000625244 TBX2Q13207 712 aaPredicted RBP13□□□□□ -0.33
SNX1-214ENST00000625244 USP10Q14694 798 aaKnown RBP13□□□□□ -0.33
SNX1-214ENST00000625244 TMEM158Q8WZ71 300 aa13□□□□□ -0.33
SNX1-214ENST00000625244 CCDC42Q96M95 316 aa13□□□□□ -0.33
SNX1-214ENST00000625244 SPATA13Q96N96 652 aa13□□□□□ -0.33
SNX1-214ENST00000625244 SH3GL2Q99962 352 aa13□□□□□ -0.33
SNX1-214ENST00000625244 DPH7Q9BTV6 452 aa13□□□□□ -0.33
SNX1-214ENST00000625244 GRPEL1Q9HAV7 217 aa13□□□□□ -0.33
SNX1-214ENST00000625244 RSPH14Q9UHP6 348 aa13□□□□□ -0.33
SNX1-214ENST00000625244 A0A1W2PPV9 198 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 FIGNL2A6NMB9 653 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 P2RX6O15547 441 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 RPN2P04844 631 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 EPXP11678 715 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 PECAM1P16284 738 aaPredicted RBP12.99□□□□□ -0.33
SNX1-214ENST00000625244 CCR7P32248 378 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 AGTR2P50052 363 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 MLF1P58340 268 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 SLC26A5P58743 744 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 ACTN3Q08043 901 aaPredicted RBP12.99□□□□□ -0.33
SNX1-214ENST00000625244 HSPA14Q0VDF9 509 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 CCSMST1Q4G0I0 132 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 KAZNQ674X7 775 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 CAPN12Q6ZSI9 719 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 SPC24Q8NBT2 197 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 RELL2Q8NC24 303 aaPredicted RBP12.99□□□□□ -0.33
SNX1-214ENST00000625244 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 OR51Q1Q8NH59 317 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 ELP5Q8TE02 316 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 ZNF592Q92610 1267 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 LPAR4Q99677 370 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 C19orf43Q9BQ61 176 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 MEGF8Q7Z7M0 2845 aa12.99□□□□□ -0.33
SNX1-214ENST00000625244 CLCA1A8K7I4 914 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 H7C0S8 307 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 QSOX1O00391 747 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 VPS26AO75436 327 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 IPO7O95373 1038 aaKnown RBP12.98□□□□□ -0.33
SNX1-214ENST00000625244 XCR1P46094 333 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 GEMP55040 296 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 FAM53BQ14153 422 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 POU4F3Q15319 338 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 PAOXQ6QHF9 649 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 PACS1Q6VY07 963 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 MDGA2Q7Z553 956 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 YTHDF3Q7Z739 585 aaKnown RBP12.98□□□□□ -0.33
SNX1-214ENST00000625244 VSIG1Q86XK7 387 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 LRRC75A-AS1Q8N1F1 130 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 CREB3L4Q8TEY5 395 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 RNASE6Q93091 150 aaKnown RBP12.98□□□□□ -0.33
SNX1-214ENST00000625244 OR2A5Q96R48 311 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 PANX2Q96RD6 677 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 SMC6Q96SB8 1091 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 ACAT2Q9BWD1 397 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 RAB11FIP5Q9BXF6 653 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 HCN3Q9P1Z3 774 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 LIPGQ9Y5X9 500 aa12.98□□□□□ -0.33
SNX1-214ENST00000625244 IGKV1-8A0A0C4DH67 115 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 PINLYPA6NC86 204 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 TUBAL3A6NHL2 446 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 FAM166BA8MTA8 275 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 BCKDKO14874 412 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 SLC16A5O15375 505 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 NRDCO43847 1150 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 OR1I1O60431 355 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 SMPD2O60906 423 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 GPC4O75487 556 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 OR56A5P0C7T3 313 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
SNX1-214ENST00000625244 AVPR1BP47901 424 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 NR2C2P49116 596 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms