RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ALDH3A2P51648 485 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 ARSFP54793 590 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 LAPTM5Q13571 262 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CKAP5Q14008 2032 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 AGERQ15109 404 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 HKDC1Q2TB90 917 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 NADK2Q4G0N4 442 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 ANKRD26P1Q6NSI1 321 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 ZNF621Q6ZSS3 439 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 GPR155Q7Z3F1 870 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 DCUN1D3Q8IWE4 304 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 CLECL1Q8IZS7 167 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 OXR1Q8N573 874 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 OR5AR1Q8NGP9 310 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 COQ8BQ96D53 544 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 GRIP2Q9C0E4 1043 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 DMRT3Q9NQL9 472 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 BTNL2Q9UIR0 455 aa18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 DNMT3AQ9Y6K1 912 aaPredicted RBP18.99■□□□□ 0.63
PCDHB11-202ENST00000624887 NUP214P35658 2090 aaPredicted RBP18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 GNG14A0A1W2PPG7 69 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 PCDH8O95206 1070 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 CCNDBP1O95273 360 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 SNAP29O95721 258 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 ADH1BP00325 375 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 HYAL1Q12794 435 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 DAG1Q14118 895 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 ITPRIPL2Q3MIP1 535 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 OTUD3Q5T2D3 398 aaPredicted RBP18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 CACUL1Q86Y37 369 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 TDHQ8IZJ6 230 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 TFGQ92734 400 aaPredicted RBP18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 SH3KBP1Q96B97 665 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 CXorf40BQ96DE9 158 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 PHF12Q96QT6 1004 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 AASDHPPTQ9NRN7 309 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 UTS2RQ9UKP6 389 aa18.98■□□□□ 0.63
PCDHB11-202ENST00000624887 OR6B1O95007 311 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 CPSF4O95639 269 aaKnown RBP18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ALPLP05186 524 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 C5AR1P21730 350 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 IDSP22304 550 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 BMP8BP34820 402 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ADARB1P78563 741 aaKnown RBP18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 KCTD21Q4G0X4 260 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PRAMEF14Q5SWL7 426 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ANXA8L1Q5VT79 327 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PRAMEF13Q5VWM6 474 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 METRNLQ641Q3 311 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PARM1Q6UWI2 310 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 LCTLQ6UWM7 567 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ZDHHC13Q8IUH4 622 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 EID3Q8N140 333 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PGBD3Q8N328 593 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 VPS37AQ8NEZ2 397 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 DGCR14Q96DF8 476 aaKnown RBP18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PYURFQ96I23 114 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 FBXL20Q96IG2 436 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 TEX101Q9BY14 249 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 TSC22D4Q9Y3Q8 395 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PCDHB11Q9Y5F2 797 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 H0YAE9 185 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 KCNK5O95279 499 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 HPRP00739 348 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 C1QCP02747 245 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PIK3CBP42338 1070 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ZNF763Q0D2J5 394 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 C2orf27AQ580R0 203 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 CPZQ66K79 652 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ERICH5Q6P6B1 374 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 TTC33Q6PID6 262 aaPredicted RBP18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 USP51Q70EK9 711 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ARMCX6Q7L4S7 300 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 COMMD6Q7Z4G1 85 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PATL1Q86TB9 770 aaKnown RBP18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 STK32CQ86UX6 486 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 HDDC3Q8N4P3 179 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 ZNF513Q8N8E2 541 aaPredicted RBP18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 NCSTNQ92542 709 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 FGF14Q92915 247 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 UBE2E3Q969T4 207 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 IL17FQ96PD4 163 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 SPNS1Q9H2V7 528 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 SERGEFQ9UGK8 458 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 GMEB1Q9Y692 573 aa18.97■□□□□ 0.63
PCDHB11-202ENST00000624887 G3V2T6 193 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 ERGP11308 486 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 GSTT1P30711 240 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 TUBA4AP68366 448 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 ARHGAP19Q14CB8 494 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 VMACQ2NL98 169 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 CES5AQ6NT32 575 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 ZCCHC8Q6NZY4 707 aaKnown RBP18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 SVOPLQ8N434 492 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 OR5K2Q8NHB8 316 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 TM7SF3Q9NS93 570 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 ATP6V1HQ9UI12 483 aa18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 PLAGL1Q9UM63 463 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms