RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 DPM1O60762 260 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 AKAP3O75969 853 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 MAPK7Q13164 816 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 DACT2Q5SW24 774 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PIGZQ86VD9 579 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 DCUN1D3Q8IWE4 304 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZFP90Q8TF47 636 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF606Q8WXB4 792 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 GIMAP5Q96F15 307 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF583Q96ND8 569 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 AMBRA1Q9C0C7 1298 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 CUTCQ9NTM9 273 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PRPF19Q9UMS4 504 aaKnown RBP6.12□□□□□ -1.43
CDKL5-205ENST00000623535 WBP11Q9Y2W2 641 aaKnown RBP6.12□□□□□ -1.43
CDKL5-205ENST00000623535 LOC102725191A0A1B0GVB3 256 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 E7ENQ6 273 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF670-ZNF695F2Z2N8 137 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 APOC4-APOC2K7ER74 178 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 APOC2P02655 101 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 SLC3A1Q07837 685 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 IRF5Q13568 498 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 TEAD2Q15562 447 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PRAMEF14Q5SWL7 426 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PRAMEF13Q5VWM6 474 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 CREB3L2Q70SY1 520 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 WDR53Q7Z5U6 358 aaPredicted RBP6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF440Q8IYI8 595 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 OR4E2Q8NGC2 313 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZDHHC1Q8WTX9 485 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 MOAP1Q96BY2 351 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 EBF3Q9H4W6 596 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 FKRPQ9H9S5 495 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 CUEDC1Q9NWM3 386 aaPredicted RBP6.12□□□□□ -1.43
CDKL5-205ENST00000623535 NDUFA13Q9P0J0 144 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 SPATA31C2B4DYI2 1134 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ADAMDEC1O15204 470 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 MID1O15344 667 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 TSHRP16473 764 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF12P17014 697 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PGCP20142 388 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 IRF9Q00978 393 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 BNIP2Q12982 314 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF630Q2M218 657 aaPredicted RBP6.12□□□□□ -1.43
CDKL5-205ENST00000623535 CYP27C1Q4G0S4 372 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PPP1R3BQ86XI6 285 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PLEKHO2Q8TD55 490 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 MEAF6Q9HAF1 191 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PARPBPQ9NWS1 579 aa6.12□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF282Q9UDV7 671 aaPredicted RBP6.12□□□□□ -1.43
CDKL5-205ENST00000623535 PTRH2Q9Y3E5 179 aaKnown RBP6.12□□□□□ -1.43
CDKL5-205ENST00000623535 TIMP1P01033 207 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 F2RP25116 425 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 IL12AP29459 219 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 RPAINQ86UA6 219 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 HIC2Q96JB3 615 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 HSPA12BQ96MM6 686 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 SLC2A13Q96QE2 648 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 KIAA1456Q9P272 454 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ACTL7AQ9Y615 435 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 CACNA1GO43497 2377 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 TPRP12270 2363 aaKnown RBP6.11□□□□□ -1.43
CDKL5-205ENST00000623535 KCNK1O00180 336 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 PLOD2O00469 737 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 MRASO14807 208 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 CLOCKO15516 846 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 KIAA0513O60268 411 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 PRLP01236 227 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ANXA4P09525 319 aaPredicted RBP6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ZSCAN5DPP0CG00 497 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 PMS2P3Q13401 168 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 PDK4Q16654 411 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 GPR33Q49SQ1 333 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 KLHDC7AQ5VTJ3 777 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF670Q9BS34 389 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 RIOK2Q9BVS4 552 aaKnown RBP6.11□□□□□ -1.43
CDKL5-205ENST00000623535 GNB4Q9HAV0 340 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 EHD3Q9NZN3 535 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 CD84Q9UIB8 345 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF222Q9UK12 451 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ITGB1BP2Q9UKP3 347 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 TSC22D4Q9Y3Q8 395 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 A0A1W2PQ09 198 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 PLOD3O60568 738 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 AGFG2O95081 481 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 RNH1P13489 461 aaKnown RBP6.11□□□□□ -1.43
CDKL5-205ENST00000623535 RAB10P61026 200 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 QPRTQ15274 297 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 FBXL8Q96CD0 374 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 HINT2Q9BX68 163 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ZNF226Q9NYT6 803 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 SOX1O00570 391 aaPredicted RBP6.11□□□□□ -1.43
CDKL5-205ENST00000623535 ERI3O43414 337 aaKnown RBP6.11□□□□□ -1.43
CDKL5-205ENST00000623535 PROSCO94903 275 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 HMGN1P05114 100 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 PBX3P40426 434 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 LIPEQ05469 1076 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 HES1Q14469 280 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 LRRC36Q1X8D7 754 aa6.11□□□□□ -1.43
CDKL5-205ENST00000623535 C10orf62Q5T681 223 aaPredicted RBP6.11□□□□□ -1.43
CDKL5-205ENST00000623535 BTNL3Q6UXE8 466 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms