RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 FAM20BO75063 409 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 XYLBO75191 536 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 LRG1P02750 347 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 CATP04040 527 aaKnown RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 IMPDH2P12268 514 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 TIMP2P16035 220 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 PTX3P26022 381 aaPredicted RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 HPCAL1P37235 193 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 MAP2K4P45985 399 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 KCNJ10P78508 379 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 RELAQ04206 551 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 NPRL3Q12980 569 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 NAE1Q13564 534 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 CLCA4Q14CN2 919 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 ARHGEF6Q15052 776 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 RGNQ15493 299 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 RGS21Q2M5E4 152 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 ADPRMQ3LIE5 342 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 SPIN4Q56A73 249 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 C10orf62Q5T681 223 aaPredicted RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 HENMT1Q5T8I9 393 aaKnown RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 CPTPQ5TA50 214 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 UBE2UQ5VVX9 321 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 PDE12Q6L8Q7 609 aaKnown RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 CCDC149Q6ZUS6 474 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 DPPA4Q7L190 304 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 TECPR1Q7Z6L1 1165 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 VTCN1Q7Z7D3 282 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 RAVER1Q8IY67 606 aaKnown RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC22A15Q8IZD6 547 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 RNF175Q8N4F7 328 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 VPS37AQ8NEZ2 397 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 OR2A12Q8NGT7 310 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 BTN2A2Q8WVV5 523 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 FCGR1BQ92637 280 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 SH3KBP1Q96B97 665 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 ITPKCQ96DU7 683 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 WDR34Q96EX3 536 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 HRASLS5Q96KN8 279 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 TOX2Q96NM4 488 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZSCAN5AQ9BUG6 496 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 BBS2Q9BXC9 721 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 MROQ9BYG7 248 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 BHLHE41Q9C0J9 482 aaPredicted RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 CCDC90BQ9GZT6 254 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZBP1Q9H171 429 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 PCDH12Q9NPG4 1184 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 ACOT13Q9NPJ3 140 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 KRT84Q9NSB2 600 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 ADPRHL2Q9NX46 363 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 CD84Q9UIB8 345 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLCO3A1Q9UIG8 710 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 FZD4Q9ULV1 537 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 VPS4AQ9UN37 437 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 BTBD3Q9Y2F9 522 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 TDRKHQ9Y2W6 561 aaKnown RBP9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 SH3GLB1Q9Y371 365 aa9.28□□□□□ -0.92
IGHV3-54-201ENST00000622166 OR2A25A4D2G3 310 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 CLDN24A6NM45 220 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 A8MVJ9 347 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 FADS2P1A8MWK0 482 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 M0R3G1 203 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 RNASET2O00584 256 aaKnown RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 NRG2O14511 850 aaPredicted RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 SUV39H1O43463 412 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 BNIP3LO60238 219 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 WBP4O75554 376 aaKnown RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 GCM2O75603 506 aaPredicted RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 SRPRAP08240 638 aaKnown RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 ANXA4P09525 319 aaPredicted RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 DDX6P26196 483 aaKnown RBP eCLIP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 TIA1P31483 386 aaKnown RBP eCLIP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 IDUAP35475 653 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 PPM1AP35813 382 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 GGT2P36268 569 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 UGT2B10P36537 528 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 TGFBR2P37173 567 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 RECQLP46063 649 aaPredicted RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 SERPINB10P48595 397 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 PRLHRP49683 370 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 ST13P50502 369 aaKnown RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 CCR3P51677 355 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 CRYBA2P53672 197 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 RPP38P78345 283 aaKnown RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 RBBP4Q09028 425 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 ITGADQ13349 1161 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 TEAD4Q15561 434 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 PROX2Q3B8N5 592 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF658BQ4V348 819 aaPredicted RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 EGFLAMQ63HQ2 1017 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLC39A5Q6ZMH5 540 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLCO4C1Q6ZQN7 724 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 Q6ZVL8 140 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 Q6ZVU0 165 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 CCDC80Q76M96 950 aa9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 TSEN54Q7Z6J9 526 aaKnown RBP9.27□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLCO6A1Q86UG4 719 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms