RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	CES4A	Q5XG92	561 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	PRR27	Q6MZM9	219 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	NAA16	Q6N069	864 aa	Predicted RBP	3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	KDELC1	Q6UW63	502 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	FAM47E	Q6ZV65	393 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	LGI2	Q8N0V4	545 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	NUP93	Q8N1F7	819 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	KLHDC1	Q8N7A1	406 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	SLC37A3	Q8NCC5	494 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	FAM218A	Q96MZ4	157 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	SEPHS2	Q99611	448 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	NKX3-1	Q99801	234 aa	Predicted RBP	3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	RAB11FIP5	Q9BXF6	653 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897		Q9H8V8	135 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	MED20	Q9H944	212 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	PCSK1N	Q9UHG2	260 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	SH3BGRL2	Q9UJC5	107 aa		3.58	□□□□□ -1.84
BRCA1-229	ENST00000621897	BBOX1	O75936	387 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	BEST1	O76090	585 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	IGHV3-13	P01766	116 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	RAB40AL	P0C0E4	278 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	CCDC175	P0C221	793 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	LINGO3	P0C6S8	592 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	AZU1	P20160	251 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	HLA-F	P30511	346 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	HSPA4	P34932	840 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	MTHFR	P42898	656 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	HCFC1	P51610	2035 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	SH3BGR	P55822	239 aa	Predicted RBP	3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	AKAP17A	Q02040	695 aa	Known RBP	3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	BFSP1	Q12934	665 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	MRPL28	Q13084	256 aa	Known RBP	3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	ITGA7	Q13683	1181 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	VEZF1	Q14119	521 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	PPA1	Q15181	289 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	ANKDD1A	Q495B1	522 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	MCMDC2	Q4G0Z9	681 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	FAM198B	Q6UWH4	519 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	DNAAF5	Q86Y56	855 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	IQCF2	Q8IXL9	164 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	TBC1D21	Q8IYX1	336 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	LINC00612	Q8N6U2	182 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	OR4K1	Q8NGD4	311 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	OR2L2	Q8NH16	312 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	BRSK1	Q8TDC3	778 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	ATP8B4	Q8TF62	1192 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	ARSG	Q96EG1	525 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	FAM71F1	Q96KD3	344 aa	Predicted RBP	3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	AGAP4	Q96P64	663 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	GCNA	Q96QF7	691 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	FAM49A	Q9H0Q0	323 aa	Predicted RBP	3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	OLAH	Q9NV23	265 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	HAO2	Q9NYQ3	351 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	RAI14	Q9P0K7	980 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	RPS6KA6	Q9UK32	745 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	MAN1B1	Q9UKM7	699 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	TMEM5	Q9Y2B1	443 aa		3.57	□□□□□ -1.84
BRCA1-229	ENST00000621897	PIK3R4	Q99570	1358 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897		A0A087WUV0	522 aa	Predicted RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	ERICH4	A6NGS2	130 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	SERINC4	A6NH21	518 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	SRRM5	B3KS81	715 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	BOLA2-SMG1P6	H3BVE0	249 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	TRIM77	I1YAP6	450 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	UBE2C	O00762	179 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	IPO8	O15397	1037 aa	Known RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	TEX28	O15482	410 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	ADAM20	O43506	726 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	ERAL1	O75616	437 aa	Known RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	RPL35A	P18077	110 aa	Known RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	HLA-DPA1	P20036	260 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	IL4R	P24394	825 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	SOX3	P41225	446 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	TSFM	P43897	325 aa	Known RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	IRX3	P78415	501 aa	Predicted RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	IL11RA	Q14626	422 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	PHKG1	Q16816	387 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	WSCD2	Q2TBF2	565 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	GPR33	Q49SQ1	333 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	C1orf141	Q5JVX7	400 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	C6orf163	Q5TEZ5	329 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	RAB12	Q6IQ22	244 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	IYD	Q6PHW0	289 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	FRRS1	Q6ZNA5	592 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	FBXL16	Q8N461	479 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	ZNF540	Q8NDQ6	660 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	C17orf47	Q8NEP4	570 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	GDAP1	Q8TB36	358 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	FBXO30	Q8TB52	745 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	RASL10A	Q92737	203 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	SYAP1	Q96A49	352 aa	Predicted RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	CNRIP1	Q96F85	164 aa	Predicted RBP	3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	DGAT2	Q96PD7	388 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	LPAR4	Q99677	370 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	KLHL4	Q9C0H6	718 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	RABEP2	Q9H5N1	569 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	CHST11	Q9NPF2	352 aa		3.56	□□□□□ -1.84
BRCA1-229	ENST00000621897	PRR34	Q9NV39	138 aa		3.56	□□□□□ -1.84

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