RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PROCP04070 461 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
CBWD3-217ENST00000621474 CAPN1P07384 714 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 C1GALT1C1LP0DN25 315 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 SCTRP47872 440 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 NFKB2Q00653 900 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 ABHD18Q0P651 414 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 KRT71Q3SY84 523 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 ADNP2Q6IQ32 1131 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 RPS27LQ71UM5 84 aaKnown RBP13.65□□□□□ -0.22
CBWD3-217ENST00000621474 SRRM1Q8IYB3 904 aaKnown RBP13.65□□□□□ -0.22
CBWD3-217ENST00000621474 CSNK1A1LQ8N752 337 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 BANPQ8N9N5 519 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 CLIP3Q96DZ5 547 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 MOCOSQ96EN8 888 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 NSUN5Q96P11 429 aaKnown RBP13.65□□□□□ -0.22
CBWD3-217ENST00000621474 RUFY1Q96T51 708 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 C1QTNF3Q9BXJ4 246 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 EHD1Q9H4M9 534 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 ZBTB26Q9HCK0 441 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 CUTCQ9NTM9 273 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 MKS1Q9NXB0 559 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 SRPK3Q9UPE1 567 aa13.65□□□□□ -0.22
CBWD3-217ENST00000621474 RRP8O43159 456 aaKnown RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 DLX3O60479 287 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 TBX6O95947 436 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 RPS17P08708 135 aaKnown RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 EEF1DP29692 281 aaKnown RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 HYAL2Q12891 473 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 DOC2AQ14183 400 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 SLBPQ14493 270 aaKnown RBP eCLIP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 GRM7Q14831 915 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 METTL2BQ6P1Q9 378 aaKnown RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 GOLGA7Q7Z5G4 137 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 IL22RA1Q8N6P7 574 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 TEX9Q8N6V9 391 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 SNX31Q8N9S9 440 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 MFSD9Q8NBP5 474 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 THAP11Q96EK4 314 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CAPS2Q9BXY5 557 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CHST8Q9H2A9 424 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 SLC22A11Q9NSA0 550 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 IRAK4Q9NWZ3 460 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CROTQ9UKG9 612 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 PCTPQ9UKL6 214 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 PADI1Q9ULC6 663 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 MRPS2Q9Y399 296 aaKnown RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 KMT2BQ9UMN6 2715 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 A0A1B0GTL3 188 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 A0A1B0GX78 115 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 HYKKA2RU49 373 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 OR1F1O43749 312 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 PLIN3O60664 434 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 LIFP15018 202 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 H2AFXP16104 143 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 GRK3P35626 688 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CASP2P42575 452 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CCT5P48643 541 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CHIT1Q13231 466 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 GTF2H2Q13888 395 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 TBCCQ15814 346 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CEP85LQ5SZL2 805 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 C1orf189Q5VU69 101 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 GTF2H2CQ6P1K8 395 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 VN1R5Q7Z5H4 357 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 KCT2Q8NC54 265 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CREB3L4Q8TEY5 395 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 RERGQ96A58 199 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 PTCD3Q96EY7 689 aaKnown RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 CRELD1Q96HD1 420 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 APOPT1Q96IL0 206 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 TMEM237Q96Q45 408 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 AIF1LQ9BQI0 150 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 NDC1Q9BTX1 674 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 AICDAQ9GZX7 198 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 ACSS2Q9NR19 701 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 ZFP69BQ9UJL9 534 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 ZNF490Q9ULM2 529 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 TMCO1Q9UM00 188 aa13.64□□□□□ -0.23
CBWD3-217ENST00000621474 TNPO3Q9Y5L0 923 aaKnown RBP13.64□□□□□ -0.23
CBWD3-217ENST00000621474 PPP6CO00743 305 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 COPEO14579 308 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 OR7A17O14581 309 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 DSCR3O14972 297 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 FOXS1O43638 330 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 SMIM24O75264 130 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 HBQ1P09105 142 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 EPB42P16452 691 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 ATP1A2P50993 1020 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 ARSFP54793 590 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 EMP3P54852 163 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 CASP8Q14790 479 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 XKR6Q5GH73 641 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 YOD1Q5VVQ6 348 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-217ENST00000621474 FAM219BQ5XKK7 198 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 TMEM214Q6NUQ4 689 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms