RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 MED26O95402 600 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 PTPN4P29074 926 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 AGTR2P50052 363 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 ALDH18A1P54886 795 aaKnown RBP17.43■□□□□ 0.38
LITAF-220ENST00000620789 RPS15P62841 145 aaKnown RBP17.43■□□□□ 0.38
LITAF-220ENST00000620789 SETDB1Q15047 1291 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 PFKFB4Q16877 469 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 NKAIN1Q4KMZ8 207 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 GARNL3Q5VVW2 1013 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 SLCO4C1Q6ZQN7 724 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 GPR155Q7Z3F1 870 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 LCA5Q86VQ0 697 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 MREGQ8N565 214 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 SNX31Q8N9S9 440 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 MFSD9Q8NBP5 474 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 ZNF740Q8NDX6 193 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 OR2W6PQ8NHA6 318 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 TM4SF19Q96DZ7 209 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 MRPL57Q9BQC6 102 aaKnown RBP17.43■□□□□ 0.38
LITAF-220ENST00000620789 AIF1LQ9BQI0 150 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 NLNQ9BYT8 704 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 ACTL8Q9H568 366 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 CPSF2Q9P2I0 782 aaKnown RBP17.43■□□□□ 0.38
LITAF-220ENST00000620789 FARSAQ9Y285 508 aaKnown RBP17.43■□□□□ 0.38
LITAF-220ENST00000620789 MGAQ8IWI9 3026 aa17.43■□□□□ 0.38
LITAF-220ENST00000620789 K7EPI3 171 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 CLGNO14967 610 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 OR1F1O43749 312 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 STATHP02808 62 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 C1GALT1C1LP0DN25 315 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 ITGAXP20702 1163 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 VARSP26640 1264 aaKnown RBP17.42■□□□□ 0.38
LITAF-220ENST00000620789 SCTRP47872 440 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 MC1RQ01726 317 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 NCF4Q15080 339 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 ATG9BQ674R7 924 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 ASPGQ86U10 573 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 ARHGEF39Q8N4T4 335 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 ENDOVQ8N8Q3 282 aaKnown RBP17.42■□□□□ 0.38
LITAF-220ENST00000620789 CAMKVQ8NCB2 501 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 MRPL46Q9H2W6 279 aaKnown RBP17.42■□□□□ 0.38
LITAF-220ENST00000620789 EHD1Q9H4M9 534 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 IFT80Q9P2H3 777 aaPredicted RBP17.42■□□□□ 0.38
LITAF-220ENST00000620789 OPTCQ9UBM4 332 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 TMCO1Q9UM00 188 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 LHX6Q9UPM6 363 aa17.42■□□□□ 0.38
LITAF-220ENST00000620789 SEC16AO15027 2179 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 A0A1W2PPM1 405 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 GOLGA8RI6L899 631 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 TK2O00142 265 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 H2AFYO75367 372 aaKnown RBP17.41■□□□□ 0.38
LITAF-220ENST00000620789 ONECUT2O95948 504 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 SLC35G6P0C7Q6 338 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 PYGBP11216 843 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 KRT15P19012 456 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 EPORP19235 508 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 CXCR2P25025 360 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 AHRP35869 848 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 RPS18P62269 152 aaKnown RBP17.41■□□□□ 0.38
LITAF-220ENST00000620789 IFFO1Q0D2I5 559 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 SLC9A5Q14940 896 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 CRTC2Q53ET0 693 aaPredicted RBP17.41■□□□□ 0.38
LITAF-220ENST00000620789 MLIPQ5VWP3 458 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 PRMT9Q6P2P2 845 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 CYP4X1Q8N118 509 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 DTWD1Q8N5C7 304 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 METTL27Q8N6F8 245 aaPredicted RBP17.41■□□□□ 0.38
LITAF-220ENST00000620789 SLC13A3Q8WWT9 602 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 MVB12AQ96EY5 273 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 SLC22A11Q9NSA0 550 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 GEMIN8Q9NWZ8 242 aaKnown RBP17.41■□□□□ 0.38
LITAF-220ENST00000620789 GPN3Q9UHW5 284 aaPredicted RBP17.41■□□□□ 0.38
LITAF-220ENST00000620789 ZFP69BQ9UJL9 534 aa17.41■□□□□ 0.38
LITAF-220ENST00000620789 TNPO3Q9Y5L0 923 aaKnown RBP17.41■□□□□ 0.38
LITAF-220ENST00000620789 NKX2-8O15522 239 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 PRAMEF4O60810 478 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 SMIM24O75264 130 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 CREG1O75629 220 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 RECKO95980 971 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 GSTA1P08263 222 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 SBK3P0C264 359 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 PIM1P11309 404 aaPredicted RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 EPB42P16452 691 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 OR1D4P47884 311 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 CYP4F2P78329 520 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 NFKB2Q00653 900 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 CDC20Q12834 499 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 SLBPQ14493 270 aaKnown RBP eCLIP17.4■□□□□ 0.38
LITAF-220ENST00000620789 PCBP2Q15366 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
LITAF-220ENST00000620789 NDUFA9Q16795 377 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 XKR6Q5GH73 641 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 PRAMEF9Q5VWM5 478 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 MRPL14Q6P1L8 145 aaKnown RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 METTL2BQ6P1Q9 378 aaKnown RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 SYVN1Q86TM6 617 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 RIBC1Q8N443 379 aaPredicted RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 TMEM151AQ8N4L1 468 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 PTGR2Q8N8N7 351 aaPredicted RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 ANKRD53Q8N9V6 530 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms