RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 HDHD5Q9BXW7 423 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 CARS2Q9HA77 564 aaKnown RBP13.68□□□□□ -0.22
SYN2-205ENST00000620175 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 MAPRE3Q9UPY8 281 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 USP54Q70EL1 1684 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 LCHNA4D1U4 455 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 CLDN9O95484 217 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 HTR3AP46098 478 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 MAN2A2P49641 1150 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 RGS6P49758 472 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 CHIT1Q13231 466 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 TRIM40Q6P9F5 258 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 Q6ZSR9 355 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
SYN2-205ENST00000620175 GALNT11Q8NCW6 608 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 ZNF385DQ9H6B1 395 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 TPT1P8Q9HAU6 139 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 AGO1Q9UL18 857 aaKnown RBP13.68□□□□□ -0.22
SYN2-205ENST00000620175 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
SYN2-205ENST00000620175 A0A0D9SEW6 157 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 HTR1AP08908 422 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 JUNBP17275 347 aaPredicted RBP13.68□□□□□ -0.22
SYN2-205ENST00000620175 MAGEA12P43365 314 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 AFF1P51825 1210 aaKnown RBP13.68□□□□□ -0.22
SYN2-205ENST00000620175 ITGA1P56199 1179 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 P2RX3P56373 397 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 IFITM2Q01629 132 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYN2-205ENST00000620175 STK11Q15831 433 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 KCTD11Q693B1 232 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 MFSD4AQ8N468 514 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 C11orf65Q8NCR3 313 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 ABCD2Q9UBJ2 740 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 PCTPQ9UKL6 214 aa13.68□□□□□ -0.22
SYN2-205ENST00000620175 DDX60LQ5H9U9 1706 aaKnown RBP13.68□□□□□ -0.22
SYN2-205ENST00000620175 CPSF4LA6NMK7 179 aaKnown RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 TARM1B6A8C7 271 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 IRAK2O43187 625 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 HPRP00739 348 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 DDCP20711 480 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 CPN2P22792 545 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 BMPR1AP36894 532 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 MAP2K3P46734 347 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 GPR68Q15743 365 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 ATXN7L2Q5T6C5 722 aaPredicted RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 BCL2L15Q5TBC7 163 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 TM9SF3Q9HD45 589 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 MYO9BQ13459 2157 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 ANXA4P09525 319 aaPredicted RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 MAZP56270 477 aaKnown RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 SIGIRRQ6IA17 410 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 ANKRD54Q6NXT1 300 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 UBE2R2Q712K3 238 aaPredicted RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 BCDIN3DQ7Z5W3 292 aaKnown RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 LHFPL3Q86UP9 236 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 ARRDC4Q8NCT1 418 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 GANCQ8TET4 914 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 VMP1Q96GC9 406 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 RNF121Q9H920 327 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 MRPL15Q9P015 296 aaKnown RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 MUTYHQ9UIF7 546 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 MGAT4AQ9UM21 535 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 POLHQ9Y253 713 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 SLC22A14Q9Y267 594 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 A0A1W2PPK0 400 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 HAS3O00219 553 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 GFRA2O00451 464 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 NUDT7P0C024 238 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 ERP29P30040 261 aaKnown RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 SDC2P34741 201 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 THPOP40225 353 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 TIGD5Q53EQ6 642 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 KIAA1161Q6NSJ0 714 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 PIANPQ8IYJ0 282 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 SPERTQ8NA61 448 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 DOK1Q99704 481 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 SLIRPQ9GZT3 109 aaKnown RBP13.67□□□□□ -0.22
SYN2-205ENST00000620175 MAU2Q9Y6X3 613 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 SHROOM3Q8TF72 1996 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 SPAG17Q6Q759 2223 aa13.67□□□□□ -0.22
SYN2-205ENST00000620175 METTL15A6NJ78 407 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 GABRDO14764 452 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 SLC30A4O14863 429 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 DRD5P21918 477 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 APEX1P27695 318 aaKnown RBP13.66□□□□□ -0.22
SYN2-205ENST00000620175 ABHD18Q0P651 414 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 DBPQ10586 325 aaPredicted RBP13.66□□□□□ -0.22
SYN2-205ENST00000620175 CPZQ66K79 652 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 FBXL22Q6P050 247 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 SERPINA9Q86WD7 417 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 ZNF614Q8N883 585 aa13.66□□□□□ -0.22
SYN2-205ENST00000620175 B3GNT7Q8NFL0 401 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms