RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	CDK18	Q07002	472 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	NAB1	Q13506	487 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	SLC1A5	Q15758	541 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	SNAP47	Q5SQN1	464 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	PRAMEF14	Q5SWL7	426 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	CXXC5	Q7LFL8	322 aa	Known RBP	5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	LRRC34	Q8IZ02	419 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	ANKRD42	Q8N9B4	389 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	GATAD2B	Q8WXI9	593 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	EID2B	Q96D98	161 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	FRMD6	Q96NE9	622 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	TTC25	Q96NG3	672 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	CEP41	Q9BYV8	373 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	NDEL1	Q9GZM8	345 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	ATXN10	Q9UBB4	475 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	SLC24A2	Q9UI40	661 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	MMACHC	Q9Y4U1	282 aa		5.18	□□□□□ -1.58
CBWD3-215	ENST00000619322	DOCK9	Q9BZ29	2069 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	MAGEB16	A2A368	324 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	PCP4L1	A6NKN8	68 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	KPNA3	O00505	521 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	PGM3	O95394	542 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CRTAM	O95727	393 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	UGT2B4	P06133	528 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	DHRS4L1	P0CG22	281 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	ENO3	P13929	434 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	PSMA2	P25787	234 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	EPHB2	P29323	1055 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	HHEX	Q03014	270 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	MGAT5	Q09328	741 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	GRB7	Q14451	532 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	TMEM53	Q6P2H8	277 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	PPP1R3B	Q86XI6	285 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CPNE9	Q8IYJ1	553 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CFAP52	Q8N1V2	620 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	FAM169B	Q8N8A8	192 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	SREK1	Q8WXA9	508 aa	Known RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	MAGEB18	Q96M61	343 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	PWWP2A	Q96N64	755 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	TNFRSF10D	Q9UBN6	386 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CTNNAL1	Q9UBT7	734 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	KCNN3	Q9UGI6	736 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	ADGRE2	Q9UHX3	823 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	ANAPC5	Q9UJX4	755 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CDYL	Q9Y232	598 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	NCOR1	O75376	2440 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	IGKV3D-11	A0A0A0MRZ8	115 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322		J3KR12	359 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	RGS16	O15492	202 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	HCRTR2	O43614	444 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CRYAB	P02511	175 aa	Known RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CTSE	P14091	401 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	BPI	P17213	487 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	ALDH3A1	P30838	453 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	GGT5	P36269	586 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	ITGA1	P56199	1179 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CALCOCO2	Q13137	446 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	EXT1	Q16394	746 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	MUM1	Q2TAK8	710 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	FHL5	Q5TD97	284 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	STEAP4	Q687X5	459 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	SPESP1	Q6UW49	350 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	QSOX2	Q6ZRP7	698 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	ASB18	Q6ZVZ8	466 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	TAOK1	Q7L7X3	1001 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	WFDC3	Q8IUB2	231 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	SCUBE1	Q8IWY4	988 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	NXPE1	Q8N323	547 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CNTD1	Q8N815	330 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	C16orf52	Q8NHV5	167 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	DCAKD	Q8WVC6	231 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	C17orf50	Q8WW18	174 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	NDRG1	Q92597	394 aa	Known RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	SLC35B4	Q969S0	331 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	AP2M1	Q96CW1	435 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	IMMP1L	Q96LU5	166 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	KIFC1	Q9BW19	673 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	UGT1A7	Q9HAW7	530 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	MKKS	Q9NPJ1	570 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	PRDM7	Q9NQW5	492 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	RARRES3	Q9UL19	164 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	TMEM98	Q9Y2Y6	226 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	OAS3	Q9Y6K5	1087 aa	Known RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	GON4L	Q3T8J9	2241 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CCT8L1P	A6NM43	557 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	APOL1	O14791	398 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	MFSD11	O43934	449 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CD48	P09326	243 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	JMJD7	P0C870	316 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	WT1	P19544	449 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	POU3F2	P20265	443 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	SERPINB3	P29508	390 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	STIP1	P31948	543 aa	Known RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	PPARG	P37231	505 aa	Predicted RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	CA7	P43166	264 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	MAGEA4	P43358	317 aa		5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	FASTKD3	Q14CZ7	662 aa	Known RBP	5.17	□□□□□ -1.58
CBWD3-215	ENST00000619322	SEPT7	Q16181	437 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms