RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KAZNQ674X7 775 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 DENND5AQ6IQ26 1287 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 TMEM214Q6NUQ4 689 aaKnown RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 FBXO42Q6P3S6 717 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 CEP128Q6ZU80 1094 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 SLC22A16Q86VW1 577 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 SULF2Q8IWU5 870 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 RELL2Q8NC24 303 aaPredicted RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 OR6P1Q8NGX9 317 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 OR8K3Q8NH51 312 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 NRGNQ92686 78 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 RAD51AP1Q96B01 352 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 SARAFQ96BY9 339 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 SPATA13Q96N96 652 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 PIGMQ9H3S5 423 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 TRPC4Q9UBN4 977 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 EFR3BQ9Y2G0 817 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 ARL5AQ9Y689 179 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 NCKAP5O14513 1909 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 NOTCH2Q04721 2471 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 LRRD1A4D1F6 860 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 CD8B2A6NJW9 211 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 ARHGEF33A8MVX0 844 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 AHRRA9YTQ3 701 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 CD5LO43866 347 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 C1orf105O95561 183 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 THBS1P07996 1170 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 AOAHP28039 575 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 MC4RP32245 332 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 FOXN2P32314 431 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 RPS15AP62244 130 aaKnown RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 PMPCAQ10713 525 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 KEAP1Q14145 624 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 FASTKQ14296 549 aaKnown RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 BTBD16Q32M84 506 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 GXYLT1Q4G148 440 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 CHSY3Q70JA7 882 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 LAPTM4BQ86VI4 370 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 RPS19BP1Q86WX3 136 aaKnown RBP4.28□□□□□ -1.72
SNCA-213ENST00000618500 HIPK1Q86Z02 1210 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 LIX1LQ8IVB5 337 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 ZNF567Q8N184 647 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 MCOLN3Q8TDD5 553 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 BLOC1S5Q8TDH9 187 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 ASZ1Q8WWH4 475 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 NDNQ99608 321 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 TTC1Q99614 292 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 LPAR4Q99677 370 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 BPIFA3Q9BQP9 254 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 HES7Q9BYE0 225 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 UCK2Q9BZX2 261 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 LIME1Q9H400 295 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 ACKR4Q9NPB9 350 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 TTLL3Q9Y4R7 772 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 MMACHCQ9Y4U1 282 aa4.28□□□□□ -1.72
SNCA-213ENST00000618500 LRRC53A6NM62 1247 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 RNF212BA8MTL3 300 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 GPR39O43194 453 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PSTPIP1O43586 416 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 MATN4O95460 622 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SKIV2L2P42285 1042 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 ADARP55265 1226 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 TAS2R40P59535 323 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SKP1P63208 163 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 HSF1Q00613 529 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TRIM14Q14142 442 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PRPSAP1Q14558 356 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PCBP2Q15366 365 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNCA-213ENST00000618500 SPINK14Q6IE38 97 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 AFTPHQ6ULP2 937 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 LIX1Q8N485 282 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 NT5CQ8TCD5 201 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 ROBO4Q8WZ75 1007 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 ELMO1Q92556 727 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SCYL1Q96KG9 808 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SMR3AQ99954 134 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 FAM173AQ9BQD7 235 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 FSD1LQ9BXM9 530 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PRDM14Q9GZV8 571 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 OR10A4Q9H209 315 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 CALHM2Q9HA72 323 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SH2D2AQ9NP31 389 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 LUC7L2Q9Y383 392 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 MAU2Q9Y6X3 613 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 NSD1Q96L73 2696 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 EXPH5Q8NEV8 1989 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 ZFHX3Q15911 3703 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 LOC105369274A0A096LPK9 316 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 LOC102723532A0A0G2JNH3 316 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TCRBV16S1A1N1A0A5B0 115 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 MBD3L4A6NDZ8 208 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 MBD3L3A6NE82 208 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 MBD3L5A6NJ08 208 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 EIF3FO00303 357 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 CLDN4O14493 209 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 DVL2O14641 736 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 EPPINO95925 133 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TUBB4AP04350 444 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SERPING1P05155 500 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms