RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 MFSD9Q8NBP5 474 aa23.68■■□□□ 1.38
PMS1-220ENST00000618056 CAMKVQ8NCB2 501 aa23.68■■□□□ 1.38
PMS1-220ENST00000618056 PELI2Q9HAT8 420 aa23.68■■□□□ 1.38
PMS1-220ENST00000618056 ACSS2Q9NR19 701 aa23.68■■□□□ 1.38
PMS1-220ENST00000618056 ZNF282Q9UDV7 671 aaPredicted RBP23.68■■□□□ 1.38
PMS1-220ENST00000618056 DYRK1BQ9Y463 629 aa23.68■■□□□ 1.38
PMS1-220ENST00000618056 KCNE2Q9Y6J6 123 aa23.68■■□□□ 1.38
PMS1-220ENST00000618056 TRBC2A0A5B9 178 aa23.67■■□□□ 1.38
PMS1-220ENST00000618056 FEZF1A0PJY2 475 aa23.67■■□□□ 1.38
PMS1-220ENST00000618056 FOXS1O43638 330 aa23.67■■□□□ 1.38
PMS1-220ENST00000618056 DNAJB5O75953 348 aa23.67■■□□□ 1.38
PMS1-220ENST00000618056 FBLP22087 321 aaKnown RBP23.67■■□□□ 1.38
PMS1-220ENST00000618056 GGT5P36269 586 aa23.67■■□□□ 1.38
PMS1-220ENST00000618056 CATSPEREQ5SY80 951 aa23.67■■□□□ 1.38
PMS1-220ENST00000618056 PPP1R32Q7Z5V6 425 aa23.67■■□□□ 1.38
PMS1-220ENST00000618056 MMP11P24347 488 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 OCA2Q04671 838 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 CHAF1BQ13112 559 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 MROH9Q5TGP6 573 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 TBC1D1Q86TI0 1168 aaPredicted RBP23.66■■□□□ 1.38
PMS1-220ENST00000618056 ASPGQ86U10 573 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 TMEM151BQ8IW70 566 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 PDPRQ8NCN5 879 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 STT3BQ8TCJ2 826 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 TSNARE1Q96NA8 513 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 NMRAL1Q9HBL8 299 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 NFU1Q9UMS0 254 aa23.66■■□□□ 1.38
PMS1-220ENST00000618056 CNTRLQ7Z7A1 2325 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 NCF1BA6NI72 391 aaPredicted RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 NCF1CA8MVU1 366 aaPredicted RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 CEACAM4O75871 244 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 IPO13O94829 963 aaKnown RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 IGHEP01854 428 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 LTA4HP09960 611 aaKnown RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 NCF1P14598 390 aaPredicted RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 MEF2AQ02078 507 aaPredicted RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 DLG1Q12959 904 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 LACTB2Q53H82 288 aaPredicted RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 TMEM214Q6NUQ4 689 aaKnown RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 ISCA2Q86U28 154 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 TBC1D19Q8N5T2 526 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 AMER3Q8N944 861 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 STAG3L4Q8TBR4 150 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 SLC44A1Q8WWI5 657 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 SLC13A3Q8WWT9 602 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 MIEF2Q96C03 454 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 MRRFQ96E11 262 aaKnown RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 MMABQ96EY8 250 aaPredicted RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 L2HGDHQ9H9P8 463 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 P4HTMQ9NXG6 502 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 ACOT9Q9Y305 439 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 MRPS2Q9Y399 296 aaKnown RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 MAP4K5Q9Y4K4 846 aa23.65■■□□□ 1.38
PMS1-220ENST00000618056 PCDHGA9Q9Y5G4 932 aaKnown RBP23.65■■□□□ 1.38
PMS1-220ENST00000618056 A0A0A6YYC8 382 aaPredicted RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 I3L1I5 382 aaPredicted RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 PEX12O00623 359 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 WDR47O94967 919 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 NSA2O95478 260 aaKnown RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 ZGLP1P0C6A0 271 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 SLC35G6P0C7Q6 338 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 GMPRP36959 345 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 REEP5Q00765 189 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 BMPR2Q13873 1038 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 UAP1Q16222 522 aaPredicted RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 C18orf21Q32NC0 220 aaPredicted RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 SULT1C3Q6IMI6 304 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 NXPE4Q6UWF7 544 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 ZNF605Q86T29 641 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 FER1L6-AS2Q96M78 137 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 TMEM79Q9BSE2 394 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 SPNS1Q9H2V7 528 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 SOX17Q9H6I2 414 aaPredicted RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 CNOT10Q9H9A5 744 aaKnown RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 MLXIPLQ9NP71 852 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 ZNF71Q9NQZ8 489 aaPredicted RBP23.64■■□□□ 1.38
PMS1-220ENST00000618056 SNX15Q9NRS6 342 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 SEMA3GQ9NS98 782 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 IGSF5Q9NSI5 407 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 RNF112Q9ULX5 631 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 TP53TG5Q9Y2B4 290 aa23.64■■□□□ 1.38
PMS1-220ENST00000618056 BAHCC1Q9P281 2608 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 A0A087X1B8 175 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 H0YIG0 161 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 TAPBPO15533 448 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 OR1F1O43749 312 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 STATHP02808 62 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 C2P06681 752 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 GNAZP19086 355 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 TFEBP19484 476 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 AHRP35869 848 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 GDF5P43026 501 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 SCTRP47872 440 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 AVPR1BP47901 424 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 KCNC1P48547 511 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 CCL11P51671 97 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 KLC1Q07866 573 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 PWP1Q13610 501 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 DCAF10Q5QP82 559 aa23.63■■□□□ 1.37
PMS1-220ENST00000618056 TMPRSS11BQ86T26 416 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms