RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 GAS2L1Q99501 681 aaPredicted RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 POLR3FQ9H1D9 316 aaPredicted RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 LDAHQ9H6V9 325 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 TMEM138Q9NPI0 162 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 KLHL1Q9NR64 748 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 TJP2Q9UDY2 1190 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 PKP3Q9Y446 797 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 TNPO3Q9Y5L0 923 aaKnown RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 TTC24A2A3L6 582 aaPredicted RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 OR14I1A6ND48 311 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 CDC7O00311 574 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 ADAM12O43184 909 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 BEST1O76090 585 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 NR2C1P13056 603 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 PCMT1P22061 227 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 APEX1P27695 318 aaKnown RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 BAG6P46379 1132 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 RFX2P48378 723 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 CREMQ03060 361 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 RAB33AQ14088 237 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 LTB4RQ15722 352 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 OR2T5Q6IEZ7 315 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 KDELC1Q6UW63 502 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 IL27RAQ6UWB1 636 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 ZER1Q7Z7L7 766 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 CCDC190Q86UF4 302 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 GPAT4Q86UL3 456 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 C9orf62Q8N4C0 152 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 PQLC3Q8N755 202 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 OR4M2Q8NGB6 313 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 OR2T29Q8NH02 315 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 PCDH19Q8TAB3 1148 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 TRMT10AQ8TBZ6 339 aaKnown RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 ZNF419Q96HQ0 510 aaPredicted RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 KCTD7Q96MP8 289 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 HBEGFQ99075 208 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 PKMYT1Q99640 499 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 STOX2Q9P2F5 926 aaPredicted RBP7.18□□□□□ -1.26
PDE6A-205ENST00000617647 MINPP1Q9UNW1 487 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 TNS2Q63HR2 1409 aa7.18□□□□□ -1.26
PDE6A-205ENST00000617647 OR6C75A6NL08 312 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 MDM4O15151 490 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NDUFA2O43678 99 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 LCMT2O60294 686 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PPP1R11O60927 126 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ALPPP05187 535 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 FABP3P05413 133 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ALPIP09923 528 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 RHCEP18577 417 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PTAFRP25105 342 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NTRK2Q16620 822 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 AMHR2Q16671 573 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ZACNQ401N2 412 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SHQ1Q6PI26 577 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CASP12Q6UXS9 341 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ZNF367Q7RTV3 350 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SPATA19Q7Z5L4 167 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ZNF527Q8NB42 609 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NLGN4YQ8NFZ3 816 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 OR52H1Q8NGJ2 320 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 OR8D4Q8NGM9 314 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PIGBQ92521 554 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NSMAFQ92636 917 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 GAL3ST3Q96A11 431 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TRMT61AQ96FX7 289 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 P2RY11Q96G91 374 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 RNF170Q96K19 258 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ZFP3Q96NJ6 502 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ACOX2Q99424 681 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CMSS1Q9BQ75 279 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ENAMQ9NRM1 1142 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 MYEF2Q9P2K5 600 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SAMD4AQ9UPU9 718 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 COQ4Q9Y3A0 265 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TCRBV16S1A1N1A0A5B0 115 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 UBE2QL1A1L167 161 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 OR6C74A6NCV1 312 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 WTIPA6NIX2 430 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 IFRD1O00458 451 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CCNB2O95067 398 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SPDEFO95238 335 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 JCHAINP01591 159 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 HAPLN1P10915 354 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ZNF30P17039 623 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PFKLP17858 780 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SLC6A4P31645 630 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PSMD8P48556 350 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CDH8P55286 799 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 HTRA4P83105 476 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 GTF2BQ00403 316 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 AAK1Q2M2I8 961 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PTCHD3Q3KNS1 767 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 C1orf220Q5T0J3 134 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 IRAK1BP1Q5VVH5 260 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SLC6A19Q695T7 634 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 GPR139Q6DWJ6 353 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 C22orf42Q6IC83 251 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms