RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 HES2Q9Y543 173 aa9.98□□□□□ -0.81
CUL4A-212ENST00000617546 NME4O00746 187 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CDK14O94921 469 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ATE1O95260 518 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 RPL6Q02878 288 aaKnown RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 LRP8Q14114 963 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 MPPE1Q53F39 396 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 NOMO2Q5JPE7 1267 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 OR4F3Q6IEY1 312 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ZCCHC12Q6PEW1 402 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 TSPAN33Q86UF1 283 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CFAP206Q8IYR0 622 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ADGRG5Q8IZF4 528 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SDR16C5Q8N3Y7 309 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 FCRL3Q96P31 734 aaPredicted RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 PIP5K1AQ99755 562 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 AIFM2Q9BRQ8 373 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 EBPLQ9BY08 206 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 MAT2BQ9NZL9 334 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 PCDHGB2Q9Y5G2 931 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 TRAPPC13A5PLN9 417 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SLC25A12O75746 678 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SLC35G4P0C7Q5 338 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 TCEA1P23193 301 aaKnown RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 GJA9P57773 515 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ST3GAL3Q11203 375 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SF3A2Q15428 464 aaKnown RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SPHARQ15513 63 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SPANXN4Q5MJ08 99 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 PPP2R2DQ66LE6 453 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 FAM198BQ6UWH4 519 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 MTMR14Q8NCE2 650 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ARRDC4Q8NCT1 418 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 PCED1BQ96HM7 432 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 IFT46Q9NQC8 304 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ITM2CQ9NQX7 267 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 MRPL17Q9NRX2 175 aaKnown RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ZDHHC3Q9NYG2 299 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 HCN3Q9P1Z3 774 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 EXTL2Q9UBQ6 330 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 RGPD1P0DJD0 1748 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 FXYD6-FXYD2A0A087WZ82 144 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 WTIPA6NIX2 430 aaPredicted RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 C1QTNF3-AMACRE9PGA6 284 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SYN3O14994 580 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SLC16A5O15375 505 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 FGF19O95750 216 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 PRKACGP22612 351 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CDH11P55287 796 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CD47Q08722 323 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 FAM122CQ6P4D5 195 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 RNF130Q86XS8 419 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 LSM14AQ8ND56 463 aaKnown RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CHDHQ8NE62 594 aaPredicted RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 OR13F1Q8NGS4 319 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 FBXO27Q8NI29 283 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 PSMG2Q969U7 264 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ZSWIM3Q96MP5 696 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 NEDD4LQ96PU5 975 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ADAM2Q99965 735 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 FXYD6Q9H0Q3 95 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 ABCG8Q9H221 673 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 MTIF3Q9H2K0 278 aaKnown RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 TRPV4Q9HBA0 871 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 GTF2IRD1Q9UHL9 959 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CLEC4AQ9UMR7 237 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 TMEM5Q9Y2B1 443 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 NAP1L6A6NFF2 107 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CAPN5O15484 640 aaPredicted RBP9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CPN2P22792 545 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CBX5P45973 191 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 NUDT6P53370 316 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SREBF2Q12772 1141 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 PPP1R3AQ16821 1122 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 C1orf220Q5T0J3 134 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 CLEC20AQ6ZU45 233 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 RNF31Q96EP0 1072 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 SLC29A1Q99808 456 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 MTG2Q9H4K7 406 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 BRD7Q9NPI1 651 aa9.97□□□□□ -0.81
CUL4A-212ENST00000617546 YJEFN3A6XGL0 299 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 PRODHO43272 600 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 MSI1O43347 362 aaKnown RBP9.96□□□□□ -0.81
CUL4A-212ENST00000617546 ACVR2AP27037 513 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 KDELR2P33947 212 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 NOVP48745 357 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 DNASE1L1P49184 302 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 RPL13AP3Q6NVV1 102 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 GALNT7Q86SF2 657 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 IL4I1Q96RQ9 567 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 EPYCQ99645 322 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 TREM1Q9NP99 234 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 PIGVQ9NUD9 493 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 ABCB8Q9NUT2 735 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 NUBP2Q9Y5Y2 271 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 ARL5AQ9Y689 179 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 NUP188Q5SRE5 1749 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 SIGLEC1Q9BZZ2 1709 aa9.96□□□□□ -0.81
CUL4A-212ENST00000617546 ARNTLO00327 626 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms