RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GABRR3A8MPY1 467 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 TBX6O95947 436 aaPredicted RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 IDSP22304 550 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 S100A3P33764 101 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 GRIK2Q13002 908 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 MAD2L1Q13257 205 aaPredicted RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 UGT8Q16880 541 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 TMIGD1Q6UXZ0 262 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SLC22A18ASQ8N1D0 253 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 UCN3Q969E3 161 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 FAM131CQ96AQ9 280 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 PPWD1Q96BP3 646 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 LRGUKQ96M69 825 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 F2RL3Q96RI0 385 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 REXO4Q9GZR2 422 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 PREBQ9HCU5 417 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 TRPV5Q9NQA5 729 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ITM2CQ9NQX7 267 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 MRGBPQ9NV56 204 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SH3BP4Q9P0V3 963 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 C5AR2Q9P296 337 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 IGKV1-8A0A0C4DH67 115 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ARPC2O15144 300 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 PI15O43692 258 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 KCNH1O95259 989 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 IGHV4-34P06331 123 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 PIM1P11309 404 aaPredicted RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 SRFP11831 508 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 COX7A2P14406 83 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 POU3F3P20264 500 aaPredicted RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 HNRNPA2B1P22626 353 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 AQP4P55087 323 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 CLDN8P56748 225 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ELOAQ14241 798 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 SMAD2Q15796 467 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 RPE65Q16518 533 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ATG9BQ674R7 924 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 UNC5DQ6UXZ4 953 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 HACD2Q6Y1H2 254 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 COMMD6Q7Z4G1 85 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 GALNT10Q86SR1 603 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 C17orf64Q86WR6 236 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 AMER3Q8N944 861 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 FBXO15Q8NCQ5 510 aaPredicted RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 JADE3Q92613 823 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 NAF1Q96HR8 494 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 ECSITQ9BQ95 431 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 C1QTNF7Q9BXJ2 289 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ABCG4Q9H172 646 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SYNPO2LQ9H987 977 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SERHLQ9NQF3 203 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SUCOQ9UBS9 1254 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 FZD4Q9ULV1 537 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 AP4S1Q9Y587 144 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 DGKBQ9Y6T7 804 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 CACNA1IQ9P0X4 2223 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 SCN2AQ99250 2005 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 OR1F1O43749 312 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PRAMEF10O60809 474 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 NTRK1P04629 796 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PLOD1Q02809 727 aaPredicted RBP7.48□□□□□ -1.21
NEK3-207ENST00000617054 RPA4Q13156 261 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PWP1Q13610 501 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 C16orf72Q14CZ0 275 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 NRF1Q16656 503 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PRSS53Q2L4Q9 553 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ICE2Q659A1 982 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 AAGABQ6PD74 315 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ZNF621Q6ZSS3 439 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 USP30Q70CQ3 517 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 RIMKLAQ8IXN7 391 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 TBC1D21Q8IYX1 336 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PQLC1Q8N2U9 271 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 FBXL6Q8N531 539 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 OR2T34Q8NGX1 318 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 FIG4Q92562 907 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 DNASE1L2Q92874 299 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 NEUROD4Q9HD90 331 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ZNF624Q9P2J8 865 aaPredicted RBP7.48□□□□□ -1.21
NEK3-207ENST00000617054 UTS2RQ9UKP6 389 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ACSL5Q9ULC5 683 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 SPTBP11277 2137 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 LRRC72A6NJI9 287 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 FAM170BA6NMN3 283 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PCDH7O60245 1069 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 UGDHO60701 494 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 KLHL18O94889 574 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 IL6P05231 212 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 COL4A2P08572 1712 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 FOSL2P15408 326 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 HRH2P25021 359 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PTGER1P34995 402 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 PLA2G16P53816 162 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 SNRPNP63162 240 aaKnown RBP7.48□□□□□ -1.21
NEK3-207ENST00000617054 CYP51A1Q16850 503 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 UAP1L1Q3KQV9 507 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 MTX3Q5HYI7 312 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ZNF852Q6ZMS4 543 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 GPR180Q86V85 440 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 FAM129CQ86XR2 697 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms