RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 FBXL22Q6P050 247 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 NCCRP1Q6ZVX7 275 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 GOLGA7Q7Z5G4 137 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 PSMD9O00233 223 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 INMTO95050 263 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 CHRNA4P43681 627 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC25A11Q02978 314 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 ARFRP1Q13795 201 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF404Q494X3 552 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 MBLAC2Q68D91 279 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 CDCA2Q69YH5 1023 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 ALG1LQ6GMV1 187 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC36A4Q6YBV0 504 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 TPRG1Q6ZUI0 275 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 C1orf52Q8N6N3 182 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 TMEM80Q96HE8 168 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 RIOK2Q9BVS4 552 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 YIPF1Q9Y548 306 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 H0YGN5 161 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 GMFGO60234 142 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC19A2O60779 497 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 BMP8BP34820 402 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 BMP8AQ7Z5Y6 402 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 SGCDQ92629 289 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 PKP2Q99959 881 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF350Q9GZX5 532 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 CLCA3PQ9Y6N3 262 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 TEX13CA0A0J9YWL9 993 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 AGXTP21549 392 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 IL1R2P27930 398 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 NCEH1Q6PIU2 408 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 IQCHQ86VS3 1027 aa16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 LSM14AQ8ND56 463 aaKnown RBP16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF471Q9BX82 626 aaPredicted RBP16.92■□□□□ 0.3
HMGXB3-206ENST00000613459 A0A1B0GVC2 190 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 FAM170BA6NMN3 283 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 UPK3BL1B0FP48 263 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 UPK3BL2E5RIL1 263 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 I3L521 148 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 TNFP01375 233 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 CYP17A1P05093 508 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PGDP52209 483 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PRKCDQ05655 676 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PON3Q15166 354 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 GHDCQ8N2G8 530 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 CLEC4CQ8WTT0 213 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 C12orf43Q96C57 262 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ADAD1Q96M93 576 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ACTL8Q9H568 366 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 NLGN3Q9NZ94 848 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 SCDO00767 359 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 CREG1O75629 220 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 TOR1AIP1Q5JTV8 583 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 OR4F3Q6IEY1 312 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF783Q6ZMS7 281 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 NPAS3Q8IXF0 933 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF516Q92618 1163 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 OSTF1Q92882 214 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 METTL8Q9H825 291 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 NUDT15Q9NV35 164 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 FXYD6-FXYD2A0A087WZ82 144 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 H0YAE9 185 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 CKMT2P17540 419 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC6A6P31641 620 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 MLLT6P55198 1093 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 KLF1Q13351 362 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 SEC23BQ15437 767 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 GXYLT1Q4G148 440 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 SYPL2Q5VXT5 272 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 GTPBP2Q9BX10 602 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 FXYD6Q9H0Q3 95 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PIGVQ9NUD9 493 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 TMEM248Q9NWD8 314 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF536O15090 1300 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 HSD11B1P28845 292 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 CHRNA6Q15825 494 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 KIAA1614Q5VZ46 1190 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PRSS55Q6UWB4 352 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 FAM46DQ8NEK8 389 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 B3GNT4Q9C0J1 378 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 RNF6Q9Y252 685 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 C9J4A7 227 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 GSTT2P0CG29 244 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ACTR1BP42025 376 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 MAGEA11P43364 429 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 STC1P52823 247 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ACTR1AP61163 376 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 SYT16Q17RD7 645 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC25A25Q6KCM7 469 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 FIP1L1Q6UN15 594 aaKnown RBP16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 OR52E4Q8NGH9 312 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 ESAMQ96AP7 390 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 HSPBAP1Q96EW2 488 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 OR52B2Q96RD2 323 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
HMGXB3-206ENST00000613459 PCDHB11Q9Y5F2 797 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms