RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
USP39-220ENST00000613444 SDC1P18827 310 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 TACR1P25103 407 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 MNAT1P51948 309 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 RAE1P78406 368 aaKnown RBP13.68□□□□□ -0.22
USP39-220ENST00000613444 RCAN2Q14206 197 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 ANGPT1Q15389 498 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 NOXRED1Q6NXP6 359 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 KANSL1Q7Z3B3 1105 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 PAQR7Q86WK9 346 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 LIX1Q8N485 282 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 OR10G6Q8NH81 332 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 NUDT8Q8WV74 236 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 RCN3Q96D15 328 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 SIRT5Q9NXA8 310 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 BAIAP2L1Q9UHR4 511 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 HAT1O14929 419 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 TNFSF14O43557 240 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 CAPN3P20807 821 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 JAK1P23458 1154 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 HRH2P25021 359 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 BCL6P41182 706 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 LSSP48449 732 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 SIM2Q14190 667 aaPredicted RBP13.67□□□□□ -0.22
USP39-220ENST00000613444 CEP68Q76N32 757 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 TRIM73Q86UV7 250 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 PARP9Q8IXQ6 854 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 AVL9Q8NBF6 648 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 CREB3L4Q8TEY5 395 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 RSC1A1Q92681 617 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 CADM1Q9BY67 442 aaKnown RBP13.67□□□□□ -0.22
USP39-220ENST00000613444 OR51B5Q9H339 312 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 FSCN3Q9NQT6 498 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 EVA1BQ9NVM1 165 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 HRASLS2Q9NWW9 162 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 ADGRE2Q9UHX3 823 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 KLK4Q9Y5K2 254 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 ZNF318Q5VUA4 2279 aa13.67□□□□□ -0.22
USP39-220ENST00000613444 OR5K3A6NET4 321 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 GSC2O15499 205 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 OR1F1O43749 312 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 ITGAXP20702 1163 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 PPP1CAP62136 330 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 MAPRE2Q15555 327 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 C14orf28Q4W4Y0 310 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 C6orf132Q5T0Z8 1188 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 CACHD1Q5VU97 1274 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 GALNT18Q6P9A2 607 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 ZNF438Q7Z4V0 828 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 ADCK2Q7Z695 626 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 C1orf52Q8N6N3 182 aaKnown RBP13.66□□□□□ -0.22
USP39-220ENST00000613444 PPM1MQ96MI6 270 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 SLC25A23Q9BV35 468 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 MS4A8Q9BY19 250 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 CAPN10Q9HC96 672 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 SNX7Q9UNH6 387 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 RP1P56715 2156 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 A0A1B0GTQ1 180 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 GSAPA4D1B5 854 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 OR2A25A4D2G3 310 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 ASPDHA6ND91 283 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 LILRA5A6NI73 299 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 C2orf74A8MZ97 194 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 AIM2O14862 343 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 GYG2O15488 501 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 KLHL18O94889 574 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 PRPS2P11908 318 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 EZRP15311 586 aaKnown RBP13.66□□□□□ -0.22
USP39-220ENST00000613444 NQO1P15559 274 aaKnown RBP13.66□□□□□ -0.22
USP39-220ENST00000613444 PTX3P26022 381 aaPredicted RBP13.66□□□□□ -0.22
USP39-220ENST00000613444 SERPINB1P30740 379 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 HOXD12P35452 270 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 ARRB1P49407 418 aaPredicted RBP13.66□□□□□ -0.22
USP39-220ENST00000613444 CYP4F2P78329 520 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 CUL3Q13618 768 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 SPIN4Q56A73 249 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 SPESP1Q6UW49 350 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 RETREG3Q86VR2 466 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 KYQ8NBH2 561 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 TSPEARQ8WU66 669 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 TMEM74Q96NL1 305 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 SERPINI1Q99574 410 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 NPAS2Q99743 824 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 ZNF717Q9BY31 904 aaPredicted RBP13.66□□□□□ -0.22
USP39-220ENST00000613444 AICDAQ9GZX7 198 aa13.66□□□□□ -0.22
USP39-220ENST00000613444 RUVBL1Q9Y265 456 aaKnown RBP13.66□□□□□ -0.22
USP39-220ENST00000613444 FAM234BA2RU67 622 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 ANKDD1BA6NHY2 528 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 NR5A2O00482 541 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 KRT16P08779 473 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 TYRP1P17643 537 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 MAGP20916 626 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 EPHA8P29322 1005 aaPredicted RBP13.65□□□□□ -0.22
USP39-220ENST00000613444 POLR2JP52435 117 aaKnown RBP13.65□□□□□ -0.22
USP39-220ENST00000613444 ACSM2AQ08AH3 577 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 ZIC1Q15915 447 aa13.65□□□□□ -0.22
USP39-220ENST00000613444 SLC5A12Q1EHB4 618 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms