RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 RACK1P63244 317 aaKnown RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SIM2Q14190 667 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SPCS2Q15005 226 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 TAB1Q15750 504 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 PTCHD3Q3KNS1 767 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 IRAK1BP1Q5VVH5 260 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 LIPMQ5VYY2 423 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 GALNT12Q8IXK2 581 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 MAFAQ8NHW3 353 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 TRIM63Q969Q1 353 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 OTUB2Q96DC9 234 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 CENPNQ96H22 339 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 NSMCE2Q96MF7 247 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 YIPF4Q9BSR8 244 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ALG2Q9H553 416 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 DNAJC11Q9NVH1 559 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 IFT52Q9Y366 437 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 RGS14O43566 566 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 THEGLP0DJG4 465 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 LBPP18428 481 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 CXCL12P48061 93 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 TGM3Q08188 693 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 RFTN1Q14699 578 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 C9orf64Q5T6V5 341 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 KIAA0930Q6ICG6 404 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 HORMAD1Q86X24 394 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 TMEM132CQ8N3T6 1108 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ASCC1Q8N9N2 400 aaKnown RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 XAGE5Q8WWM1 108 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 IMP4Q96G21 291 aaKnown RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 NECAB3Q96P71 396 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 MACROD1Q9BQ69 325 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SLC17A9Q9BYT1 436 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ANKRD60Q9BZ19 345 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 RIBC2Q9H4K1 309 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ZBTB26Q9HCK0 441 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 RASSF1Q9NS23 344 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SLCO1B7G3V0H7 640 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 BCAS1O75363 584 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 OTCP00480 354 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 C9P02748 559 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 CXCL10P02778 98 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ARRB2P32121 409 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 HTR7P34969 479 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ST13P50502 369 aaKnown RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ARF5P84085 180 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 STX4Q12846 297 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 TUBB3Q13509 450 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 DEFB133Q30KQ1 61 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 KIAA0408Q6ZU52 694 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 CADM2Q8N3J6 435 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SLC9A6Q92581 669 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 TFAP2CQ92754 450 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 OTUB1Q96FW1 271 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 PANX1Q96RD7 426 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 NUAK2Q9H093 628 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 OR51B5Q9H339 312 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SCN3BQ9NY72 215 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ZDHHC3Q9NYG2 299 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 FNIP2Q9P278 1114 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 VTI1BQ9UEU0 232 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 EMCNQ9ULC0 261 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SNX6Q9UNH7 406 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 XPNPEP2O43895 674 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 ADRB3P13945 408 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 KRT20P35900 424 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 INPP1P49441 399 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 RNF144AP50876 292 aaPredicted RBP10.5□□□□□ -0.73
FAM3A-221ENST00000612856 CCINQ13939 588 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 HERC3Q15034 1050 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 MAPKAPK3Q16644 382 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 INAVAQ3KP66 663 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 SPANXN2Q5MJ10 180 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 PLEKHG7Q6ZR37 379 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 Q6ZS52 159 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 VN1R5Q7Z5H4 357 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 ZC3HC1Q86WB0 502 aaKnown RBP10.5□□□□□ -0.73
FAM3A-221ENST00000612856 ARHGAP12Q8IWW6 846 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 FBXO15Q8NCQ5 510 aaPredicted RBP10.5□□□□□ -0.73
FAM3A-221ENST00000612856 PRDM6Q9NQX0 595 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 HRASLS2Q9NWW9 162 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 EHD3Q9NZN3 535 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 APOBEC3BQ9UH17 382 aaKnown RBP10.5□□□□□ -0.73
FAM3A-221ENST00000612856 PPIEQ9UNP9 301 aaKnown RBP10.5□□□□□ -0.73
FAM3A-221ENST00000612856 ABLIM3O94929 683 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 MED26O95402 600 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 C8orf89P0DMQ9 161 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 BPIP17213 487 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 PTNP21246 168 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 ATP6V0D1P61421 351 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 SPATC1Q76KD6 591 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 THAP5Q7Z6K1 395 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 SGCDQ92629 289 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 NODALQ96S42 347 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 AMBNQ9NP70 447 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 MAGED1Q9Y5V3 778 aaPredicted RBP10.5□□□□□ -0.73
FAM3A-221ENST00000612856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.5□□□□□ -0.73
FAM3A-221ENST00000612856 FAM159BA6NKW6 160 aa10.5□□□□□ -0.73
FAM3A-221ENST00000612856 PRRT4C9JH25 899 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 286.5 ms